Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL11A1P12107 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COL11A1P12107 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL11A1P12107 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
COL11A1P12107 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
COL11A1P12107 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.59■□□□□ 0.57
COL11A1P12107 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL11A1P12107 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.59■□□□□ 0.57
COL11A1P12107 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL11A1P12107 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
COL11A1P12107 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL11A1P12107 KRT17P7-201ENST00000451704 1104 ntBASIC18.59■□□□□ 0.57
COL11A1P12107 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.59■□□□□ 0.57
COL11A1P12107 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.59■□□□□ 0.57
COL11A1P12107 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
COL11A1P12107 SNX29P1-201ENST00000548357 1007 ntBASIC18.59■□□□□ 0.57
COL11A1P12107 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.59■□□□□ 0.57
COL11A1P12107 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL11A1P12107 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
COL11A1P12107 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL11A1P12107 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL11A1P12107 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL11A1P12107 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
COL11A1P12107 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.59■□□□□ 0.57
COL11A1P12107 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COL11A1P12107 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL11A1P12107 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
COL11A1P12107 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL11A1P12107 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL11A1P12107 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
COL11A1P12107 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
COL11A1P12107 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL11A1P12107 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.58■□□□□ 0.57
COL11A1P12107 AC005622.1-201ENST00000636801 1703 ntBASIC18.58■□□□□ 0.57
COL11A1P12107 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL11A1P12107 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL11A1P12107 MIR1909-201ENST00000411312 80 ntBASIC18.58■□□□□ 0.57
COL11A1P12107 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.58■□□□□ 0.57
COL11A1P12107 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL11A1P12107 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.58■□□□□ 0.57
COL11A1P12107 AL139010.1-201ENST00000454878 894 ntBASIC18.58■□□□□ 0.57
COL11A1P12107 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.58■□□□□ 0.57
COL11A1P12107 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL11A1P12107 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COL11A1P12107 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
COL11A1P12107 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
COL11A1P12107 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL11A1P12107 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL11A1P12107 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL11A1P12107 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL11A1P12107 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL11A1P12107 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.58■□□□□ 0.56
COL11A1P12107 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL11A1P12107 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL11A1P12107 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COL11A1P12107 SPDYE17-201ENST00000412399 783 ntBASIC18.58■□□□□ 0.56
COL11A1P12107 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL11A1P12107 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.58■□□□□ 0.56
COL11A1P12107 AC025048.3-201ENST00000590609 569 ntBASIC18.58■□□□□ 0.56
COL11A1P12107 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
COL11A1P12107 AC008735.3-201ENST00000596646 500 ntBASIC18.58■□□□□ 0.56
COL11A1P12107 AC005702.4-201ENST00000618393 416 ntBASIC18.58■□□□□ 0.56
COL11A1P12107 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.58■□□□□ 0.56
COL11A1P12107 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COL11A1P12107 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL11A1P12107 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL11A1P12107 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.57■□□□□ 0.56
COL11A1P12107 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.57■□□□□ 0.56
COL11A1P12107 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL11A1P12107 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
COL11A1P12107 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
COL11A1P12107 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
COL11A1P12107 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL11A1P12107 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL11A1P12107 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL11A1P12107 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.57■□□□□ 0.56
COL11A1P12107 U82695.1-201ENST00000635752 1889 ntBASIC18.57■□□□□ 0.56
COL11A1P12107 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL11A1P12107 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COL11A1P12107 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.57■□□□□ 0.56
COL11A1P12107 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.57■□□□□ 0.56
COL11A1P12107 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.57■□□□□ 0.56
COL11A1P12107 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.57■□□□□ 0.56
COL11A1P12107 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.57■□□□□ 0.56
COL11A1P12107 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.57■□□□□ 0.56
COL11A1P12107 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.57■□□□□ 0.56
COL11A1P12107 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.57■□□□□ 0.56
COL11A1P12107 AC099568.2-201ENST00000609194 695 ntBASIC18.57■□□□□ 0.56
COL11A1P12107 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COL11A1P12107 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.57■□□□□ 0.56
COL11A1P12107 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COL11A1P12107 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.57■□□□□ 0.56
COL11A1P12107 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL11A1P12107 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
COL11A1P12107 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COL11A1P12107 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
COL11A1P12107 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.56■□□□□ 0.56
COL11A1P12107 CLK3P2-201ENST00000427566 1453 ntBASIC18.56■□□□□ 0.56
COL11A1P12107 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COL11A1P12107 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms