Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LAMP1P11279 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.77■□□□□ 0.11
LAMP1P11279 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.11
LAMP1P11279 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
LAMP1P11279 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
LAMP1P11279 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.77■□□□□ 0.11
LAMP1P11279 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LAMP1P11279 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
LAMP1P11279 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LAMP1P11279 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.77■□□□□ 0.11
LAMP1P11279 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
LAMP1P11279 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
LAMP1P11279 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.77■□□□□ 0.11
LAMP1P11279 AL365203.3-201ENST00000609742 2057 ntBASIC15.77■□□□□ 0.11
LAMP1P11279 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.77■□□□□ 0.11
LAMP1P11279 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LAMP1P11279 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LAMP1P11279 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LAMP1P11279 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.77■□□□□ 0.11
LAMP1P11279 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LAMP1P11279 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.76■□□□□ 0.11
LAMP1P11279 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.76■□□□□ 0.11
LAMP1P11279 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.76■□□□□ 0.11
LAMP1P11279 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
LAMP1P11279 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.76■□□□□ 0.11
LAMP1P11279 HCG4-201ENST00000418983 998 ntBASIC15.76■□□□□ 0.11
LAMP1P11279 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.76■□□□□ 0.11
LAMP1P11279 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.76■□□□□ 0.11
LAMP1P11279 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.76■□□□□ 0.11
LAMP1P11279 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.76■□□□□ 0.11
LAMP1P11279 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.76■□□□□ 0.11
LAMP1P11279 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.76■□□□□ 0.11
LAMP1P11279 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.76■□□□□ 0.11
LAMP1P11279 AC148477.8-201ENST00000624298 468 ntBASIC15.76■□□□□ 0.11
LAMP1P11279 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.76■□□□□ 0.11
LAMP1P11279 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.76■□□□□ 0.11
LAMP1P11279 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.76■□□□□ 0.11
LAMP1P11279 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
LAMP1P11279 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.76■□□□□ 0.11
LAMP1P11279 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.76■□□□□ 0.11
LAMP1P11279 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LAMP1P11279 AL139384.1-201ENST00000612143 3047 ntBASIC15.76■□□□□ 0.11
LAMP1P11279 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
LAMP1P11279 AL162727.3-201ENST00000635661 2787 ntBASIC15.75■□□□□ 0.11
LAMP1P11279 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.75■□□□□ 0.11
LAMP1P11279 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
LAMP1P11279 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LAMP1P11279 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LAMP1P11279 AC006449.6-201ENST00000612330 2296 ntBASIC15.75■□□□□ 0.11
LAMP1P11279 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LAMP1P11279 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LAMP1P11279 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
LAMP1P11279 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.75■□□□□ 0.11
LAMP1P11279 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LAMP1P11279 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
LAMP1P11279 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LAMP1P11279 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.75■□□□□ 0.11
LAMP1P11279 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LAMP1P11279 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LAMP1P11279 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.75■□□□□ 0.11
LAMP1P11279 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.75■□□□□ 0.11
LAMP1P11279 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LAMP1P11279 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LAMP1P11279 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LAMP1P11279 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.75■□□□□ 0.11
LAMP1P11279 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.75■□□□□ 0.11
LAMP1P11279 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.75■□□□□ 0.11
LAMP1P11279 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.75■□□□□ 0.11
LAMP1P11279 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.75■□□□□ 0.11
LAMP1P11279 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.75■□□□□ 0.11
LAMP1P11279 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.75■□□□□ 0.11
LAMP1P11279 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.75■□□□□ 0.11
LAMP1P11279 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.75■□□□□ 0.11
LAMP1P11279 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LAMP1P11279 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.75■□□□□ 0.11
LAMP1P11279 OR7E47P-204ENST00000575924 449 ntBASIC15.75■□□□□ 0.11
LAMP1P11279 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms