Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 AC105233.2-201ENST00000523697 349 ntBASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 AF228730.5-201ENST00000530288 346 ntBASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 AC008677.1-201ENST00000519230 1561 ntBASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RAB40ALP0C0E4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 INGX-202ENST00000489074 768 ntBASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 MIR4745-201ENST00000577608 62 ntBASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 AC073389.1-201ENST00000595595 795 ntBASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 AL158211.3-201ENST00000607385 239 ntBASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RAB40ALP0C0E4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 CROCCP1-201ENST00000426910 5675 ntBASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAB40ALP0C0E4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms