Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.19■□□□□ 0.5
CLTAP09496 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CLTAP09496 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.19■□□□□ 0.5
CLTAP09496 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CLTAP09496 AL161645.1-201ENST00000622716 1255 ntBASIC18.19■□□□□ 0.5
CLTAP09496 AC079781.4-201ENST00000641908 219 ntBASIC18.19■□□□□ 0.5
CLTAP09496 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CLTAP09496 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLTAP09496 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.19■□□□□ 0.5
CLTAP09496 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.19■□□□□ 0.5
CLTAP09496 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.19■□□□□ 0.5
CLTAP09496 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLTAP09496 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLTAP09496 RNF216P1-203ENST00000404404 2427 ntBASIC18.19■□□□□ 0.5
CLTAP09496 AC078925.2-201ENST00000624013 1973 ntBASIC18.19■□□□□ 0.5
CLTAP09496 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.19■□□□□ 0.5
CLTAP09496 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLTAP09496 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLTAP09496 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.18■□□□□ 0.5
CLTAP09496 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
CLTAP09496 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.18■□□□□ 0.5
CLTAP09496 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
CLTAP09496 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.18■□□□□ 0.5
CLTAP09496 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CLTAP09496 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.18■□□□□ 0.5
CLTAP09496 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.18■□□□□ 0.5
CLTAP09496 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CLTAP09496 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.18■□□□□ 0.5
CLTAP09496 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CLTAP09496 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.18■□□□□ 0.5
CLTAP09496 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.18■□□□□ 0.5
CLTAP09496 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.18■□□□□ 0.5
CLTAP09496 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.18■□□□□ 0.5
CLTAP09496 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CLTAP09496 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLTAP09496 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.18■□□□□ 0.5
CLTAP09496 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CLTAP09496 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.18■□□□□ 0.5
CLTAP09496 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLTAP09496 AL645728.1-201ENST00000366221 2101 ntBASIC18.17■□□□□ 0.5
CLTAP09496 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLTAP09496 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLTAP09496 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
CLTAP09496 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLTAP09496 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CLTAP09496 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLTAP09496 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.17■□□□□ 0.5
CLTAP09496 AL355306.1-201ENST00000415580 579 ntBASIC18.17■□□□□ 0.5
CLTAP09496 AL671277.1-201ENST00000429656 993 ntBASIC18.17■□□□□ 0.5
CLTAP09496 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.17■□□□□ 0.5
CLTAP09496 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.17■□□□□ 0.5
CLTAP09496 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.17■□□□□ 0.5
CLTAP09496 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLTAP09496 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.17■□□□□ 0.5
CLTAP09496 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.17■□□□□ 0.5
CLTAP09496 FAM86C2P-203ENST00000528684 1004 ntBASIC18.17■□□□□ 0.5
CLTAP09496 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.17■□□□□ 0.5
CLTAP09496 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CLTAP09496 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CLTAP09496 AL139011.1-202ENST00000642063 584 ntBASIC18.17■□□□□ 0.5
CLTAP09496 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLTAP09496 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLTAP09496 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLTAP09496 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.17■□□□□ 0.5
CLTAP09496 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLTAP09496 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.17■□□□□ 0.5
CLTAP09496 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLTAP09496 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLTAP09496 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CLTAP09496 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.17■□□□□ 0.5
CLTAP09496 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLTAP09496 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLTAP09496 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLTAP09496 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLTAP09496 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CLTAP09496 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLTAP09496 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.16■□□□□ 0.5
CLTAP09496 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CLTAP09496 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLTAP09496 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms