Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.58■□□□□ 0.56
CYP3A4P08684 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.58■□□□□ 0.56
CYP3A4P08684 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYP3A4P08684 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.58■□□□□ 0.56
CYP3A4P08684 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYP3A4P08684 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYP3A4P08684 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYP3A4P08684 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYP3A4P08684 ALOX12P2-203ENST00000570921 1945 ntBASIC18.58■□□□□ 0.56
CYP3A4P08684 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYP3A4P08684 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.58■□□□□ 0.56
CYP3A4P08684 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYP3A4P08684 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CYP3A4P08684 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CYP3A4P08684 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYP3A4P08684 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYP3A4P08684 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CYP3A4P08684 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.57■□□□□ 0.56
CYP3A4P08684 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CYP3A4P08684 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYP3A4P08684 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYP3A4P08684 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CYP3A4P08684 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYP3A4P08684 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYP3A4P08684 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYP3A4P08684 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYP3A4P08684 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CYP3A4P08684 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CYP3A4P08684 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.57■□□□□ 0.56
CYP3A4P08684 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.57■□□□□ 0.56
CYP3A4P08684 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.57■□□□□ 0.56
CYP3A4P08684 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.57■□□□□ 0.56
CYP3A4P08684 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.57■□□□□ 0.56
CYP3A4P08684 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.57■□□□□ 0.56
CYP3A4P08684 AC018529.1-201ENST00000613063 361 ntBASIC18.57■□□□□ 0.56
CYP3A4P08684 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.57■□□□□ 0.56
CYP3A4P08684 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CYP3A4P08684 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.57■□□□□ 0.56
CYP3A4P08684 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.57■□□□□ 0.56
CYP3A4P08684 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYP3A4P08684 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYP3A4P08684 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYP3A4P08684 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CYP3A4P08684 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYP3A4P08684 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYP3A4P08684 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.57■□□□□ 0.56
CYP3A4P08684 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.57■□□□□ 0.56
CYP3A4P08684 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CYP3A4P08684 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.56■□□□□ 0.56
CYP3A4P08684 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CYP3A4P08684 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CYP3A4P08684 U82695.1-201ENST00000635752 1889 ntBASIC18.56■□□□□ 0.56
CYP3A4P08684 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CYP3A4P08684 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CYP3A4P08684 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CYP3A4P08684 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CYP3A4P08684 AC008677.1-201ENST00000519230 1561 ntBASIC18.56■□□□□ 0.56
CYP3A4P08684 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.56■□□□□ 0.56
CYP3A4P08684 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CYP3A4P08684 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.56■□□□□ 0.56
CYP3A4P08684 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CYP3A4P08684 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CYP3A4P08684 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CYP3A4P08684 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CYP3A4P08684 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.56■□□□□ 0.56
CYP3A4P08684 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.56■□□□□ 0.56
CYP3A4P08684 AC051619.7-201ENST00000568314 623 ntBASIC18.56■□□□□ 0.56
CYP3A4P08684 AC027796.2-201ENST00000575326 344 ntBASIC18.56■□□□□ 0.56
CYP3A4P08684 AC061975.2-201ENST00000581722 295 ntBASIC18.56■□□□□ 0.56
CYP3A4P08684 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CYP3A4P08684 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CYP3A4P08684 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.56■□□□□ 0.56
CYP3A4P08684 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CYP3A4P08684 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CYP3A4P08684 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CYP3A4P08684 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CYP3A4P08684 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CYP3A4P08684 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CYP3A4P08684 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.56■□□□□ 0.56
CYP3A4P08684 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CYP3A4P08684 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CYP3A4P08684 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CYP3A4P08684 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CYP3A4P08684 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CYP3A4P08684 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.56■□□□□ 0.56
CYP3A4P08684 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CYP3A4P08684 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CYP3A4P08684 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CYP3A4P08684 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CYP3A4P08684 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CYP3A4P08684 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.55■□□□□ 0.56
CYP3A4P08684 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CYP3A4P08684 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CYP3A4P08684 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.55■□□□□ 0.56
CYP3A4P08684 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.55■□□□□ 0.56
CYP3A4P08684 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CYP3A4P08684 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CYP3A4P08684 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CYP3A4P08684 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CYP3A4P08684 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms