Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.99■□□□□ 0.63
TPM2P07951 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM2P07951 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM2P07951 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM2P07951 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
TPM2P07951 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
TPM2P07951 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.99■□□□□ 0.63
TPM2P07951 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM2P07951 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.99■□□□□ 0.63
TPM2P07951 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TPM2P07951 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.99■□□□□ 0.63
TPM2P07951 AC104076.2-201ENST00000448912 469 ntBASIC18.99■□□□□ 0.63
TPM2P07951 STK19B-204ENST00000512515 211 ntBASIC18.99■□□□□ 0.63
TPM2P07951 AC009533.2-201ENST00000543664 586 ntBASIC18.99■□□□□ 0.63
TPM2P07951 STK25P1-201ENST00000585406 838 ntBASIC18.99■□□□□ 0.63
TPM2P07951 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.99■□□□□ 0.63
TPM2P07951 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM2P07951 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
TPM2P07951 AC092053.1-201ENST00000605787 1936 ntBASIC18.99■□□□□ 0.63
TPM2P07951 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM2P07951 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.99■□□□□ 0.63
TPM2P07951 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TPM2P07951 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TPM2P07951 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM2P07951 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.99■□□□□ 0.63
TPM2P07951 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.99■□□□□ 0.63
TPM2P07951 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
TPM2P07951 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TPM2P07951 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TPM2P07951 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TPM2P07951 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM2P07951 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.98■□□□□ 0.63
TPM2P07951 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM2P07951 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM2P07951 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TPM2P07951 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPM2P07951 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.98■□□□□ 0.63
TPM2P07951 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM2P07951 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TPM2P07951 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPM2P07951 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
TPM2P07951 KRT8P26-201ENST00000534154 1276 ntBASIC18.98■□□□□ 0.63
TPM2P07951 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPM2P07951 AL353801.3-201ENST00000609898 542 ntBASIC18.98■□□□□ 0.63
TPM2P07951 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.98■□□□□ 0.63
TPM2P07951 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM2P07951 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM2P07951 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM2P07951 KRT8P10-201ENST00000450021 1447 ntBASIC18.98■□□□□ 0.63
TPM2P07951 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TPM2P07951 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TPM2P07951 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TPM2P07951 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.97■□□□□ 0.63
TPM2P07951 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.97■□□□□ 0.63
TPM2P07951 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TPM2P07951 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.97■□□□□ 0.63
TPM2P07951 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.97■□□□□ 0.63
TPM2P07951 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.97■□□□□ 0.63
TPM2P07951 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.97■□□□□ 0.63
TPM2P07951 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.97■□□□□ 0.63
TPM2P07951 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.97■□□□□ 0.63
TPM2P07951 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.97■□□□□ 0.63
TPM2P07951 AC246785.2-201ENST00000432512 513 ntBASIC18.97■□□□□ 0.63
TPM2P07951 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
TPM2P07951 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.97■□□□□ 0.63
TPM2P07951 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.97■□□□□ 0.63
TPM2P07951 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TPM2P07951 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.97■□□□□ 0.63
TPM2P07951 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.97■□□□□ 0.63
TPM2P07951 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TPM2P07951 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.97■□□□□ 0.63
TPM2P07951 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TPM2P07951 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.97■□□□□ 0.63
TPM2P07951 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC18.97■□□□□ 0.63
TPM2P07951 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TPM2P07951 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms