Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RETP07949 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.74■□□□□ 0.27
RETP07949 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.74■□□□□ 0.27
RETP07949 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.74■□□□□ 0.27
RETP07949 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RETP07949 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RETP07949 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
RETP07949 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RETP07949 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.74■□□□□ 0.27
RETP07949 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RETP07949 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RETP07949 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RETP07949 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.73■□□□□ 0.27
RETP07949 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RETP07949 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RETP07949 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RETP07949 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RETP07949 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RETP07949 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RETP07949 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RETP07949 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RETP07949 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.73■□□□□ 0.27
RETP07949 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RETP07949 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RETP07949 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
RETP07949 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RETP07949 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.73■□□□□ 0.27
RETP07949 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.73■□□□□ 0.27
RETP07949 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.73■□□□□ 0.27
RETP07949 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.73■□□□□ 0.27
RETP07949 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RETP07949 AL606495.2-201ENST00000605867 535 ntBASIC16.73■□□□□ 0.27
RETP07949 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.73■□□□□ 0.27
RETP07949 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RETP07949 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RETP07949 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RETP07949 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.73■□□□□ 0.27
RETP07949 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RETP07949 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
RETP07949 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RETP07949 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RETP07949 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RETP07949 REXO1L11P-201ENST00000620964 1927 ntBASIC16.72■□□□□ 0.27
RETP07949 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RETP07949 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RETP07949 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.72■□□□□ 0.27
RETP07949 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RETP07949 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RETP07949 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RETP07949 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
RETP07949 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RETP07949 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RETP07949 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RETP07949 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RETP07949 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RETP07949 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RETP07949 AL353779.1-201ENST00000434793 351 ntBASIC16.72■□□□□ 0.27
RETP07949 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.72■□□□□ 0.27
RETP07949 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RETP07949 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.72■□□□□ 0.27
RETP07949 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.72■□□□□ 0.27
RETP07949 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.72■□□□□ 0.27
RETP07949 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.72■□□□□ 0.27
RETP07949 AC010336.2-201ENST00000564226 506 ntBASIC16.72■□□□□ 0.27
RETP07949 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RETP07949 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RETP07949 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RETP07949 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RETP07949 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RETP07949 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.72■□□□□ 0.27
RETP07949 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RETP07949 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RETP07949 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.72■□□□□ 0.27
RETP07949 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RETP07949 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RETP07949 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.71■□□□□ 0.27
RETP07949 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.71■□□□□ 0.27
RETP07949 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RETP07949 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RETP07949 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RETP07949 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.71■□□□□ 0.27
RETP07949 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.71■□□□□ 0.27
RETP07949 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RETP07949 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RETP07949 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RETP07949 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.71■□□□□ 0.27
RETP07949 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RETP07949 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.71■□□□□ 0.27
RETP07949 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.71■□□□□ 0.27
RETP07949 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.71■□□□□ 0.27
RETP07949 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RETP07949 AC140912.1-201ENST00000577171 1054 ntBASIC16.71■□□□□ 0.27
RETP07949 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.71■□□□□ 0.27
RETP07949 AL162274.1-201ENST00000617191 1098 ntBASIC16.71■□□□□ 0.27
RETP07949 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RETP07949 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.71■□□□□ 0.27
RETP07949 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.71■□□□□ 0.27
RETP07949 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.71■□□□□ 0.27
RETP07949 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RETP07949 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms