Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 GPAA1P2-202ENST00000606848 1787 ntBASIC14□□□□□ -0.17
CD74P04233 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14□□□□□ -0.17
CD74P04233 SSR4P1-203ENST00000599569 2260 ntBASIC14□□□□□ -0.17
CD74P04233 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CD74P04233 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CD74P04233 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14□□□□□ -0.17
CD74P04233 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14□□□□□ -0.17
CD74P04233 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 AC006486.2-201ENST00000624246 2199 ntBASIC14□□□□□ -0.17
CD74P04233 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CD74P04233 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14□□□□□ -0.17
CD74P04233 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14□□□□□ -0.17
CD74P04233 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CD74P04233 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD74P04233 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.99□□□□□ -0.17
CD74P04233 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.99□□□□□ -0.17
CD74P04233 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CD74P04233 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.99□□□□□ -0.17
CD74P04233 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.99□□□□□ -0.17
CD74P04233 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.99□□□□□ -0.17
CD74P04233 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.99□□□□□ -0.17
CD74P04233 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
CD74P04233 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.99□□□□□ -0.17
CD74P04233 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.99□□□□□ -0.17
CD74P04233 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.99□□□□□ -0.17
CD74P04233 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.99□□□□□ -0.17
CD74P04233 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CD74P04233 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.99□□□□□ -0.17
CD74P04233 AL590326.2-201ENST00000625139 305 ntBASIC13.99□□□□□ -0.17
CD74P04233 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.99□□□□□ -0.17
CD74P04233 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.99□□□□□ -0.17
CD74P04233 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CD74P04233 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.99□□□□□ -0.17
CD74P04233 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.99□□□□□ -0.17
CD74P04233 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
CD74P04233 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CD74P04233 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD74P04233 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.98□□□□□ -0.17
CD74P04233 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.98□□□□□ -0.17
CD74P04233 PRAL-201ENST00000624952 3286 ntBASIC13.98□□□□□ -0.17
CD74P04233 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD74P04233 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CD74P04233 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.98□□□□□ -0.17
CD74P04233 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD74P04233 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.98□□□□□ -0.17
CD74P04233 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CD74P04233 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.98□□□□□ -0.17
CD74P04233 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CD74P04233 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD74P04233 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD74P04233 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CD74P04233 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD74P04233 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD74P04233 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD74P04233 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD74P04233 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD74P04233 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
CD74P04233 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD74P04233 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CD74P04233 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.98□□□□□ -0.17
CD74P04233 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD74P04233 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD74P04233 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.98□□□□□ -0.17
CD74P04233 SPDYE21P-201ENST00000413323 827 ntBASIC13.98□□□□□ -0.17
CD74P04233 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD74P04233 TSPY22P-201ENST00000427496 604 ntBASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms