Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 AL137013.1-201ENST00000432946 1228 ntBASIC14.38□□□□□ -0.11
HLA-DQB1P01920 HOMER2P1-201ENST00000455653 964 ntBASIC14.38□□□□□ -0.11
HLA-DQB1P01920 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 AL353801.3-201ENST00000609898 542 ntBASIC14.38□□□□□ -0.11
HLA-DQB1P01920 AC005363.2-201ENST00000618631 242 ntBASIC14.38□□□□□ -0.11
HLA-DQB1P01920 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
HLA-DQB1P01920 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 Z83836.1-201ENST00000624605 1642 ntBASIC14.37□□□□□ -0.11
HLA-DQB1P01920 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 LINC00528-201ENST00000600723 2160 ntBASIC14.37□□□□□ -0.11
HLA-DQB1P01920 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 PRAL-201ENST00000624952 3286 ntBASIC14.37□□□□□ -0.11
HLA-DQB1P01920 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 TERF1P1-201ENST00000311003 1181 ntBASIC14.37□□□□□ -0.11
HLA-DQB1P01920 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 TSPY5P-201ENST00000426936 936 ntBASIC14.37□□□□□ -0.11
HLA-DQB1P01920 AC117947.1-201ENST00000427448 529 ntBASIC14.37□□□□□ -0.11
HLA-DQB1P01920 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 RNF126P1-202ENST00000569893 925 ntBASIC14.37□□□□□ -0.11
HLA-DQB1P01920 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 KRT8P49-201ENST00000604166 1432 ntBASIC14.37□□□□□ -0.11
HLA-DQB1P01920 AC073508.3-201ENST00000619697 1419 ntBASIC14.37□□□□□ -0.11
HLA-DQB1P01920 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 AL671710.1-201ENST00000610245 2349 ntBASIC14.37□□□□□ -0.11
HLA-DQB1P01920 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.37□□□□□ -0.11
HLA-DQB1P01920 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 REXO1L8P-201ENST00000604378 1897 ntBASIC14.36□□□□□ -0.11
HLA-DQB1P01920 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 AP002414.1-201ENST00000391405 1147 ntBASIC14.36□□□□□ -0.11
HLA-DQB1P01920 RNF152P1-201ENST00000397754 604 ntBASIC14.36□□□□□ -0.11
HLA-DQB1P01920 KLF4P1-201ENST00000412782 1185 ntBASIC14.36□□□□□ -0.11
HLA-DQB1P01920 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 KRT18P38-201ENST00000449496 1282 ntBASIC14.36□□□□□ -0.11
HLA-DQB1P01920 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DQB1P01920 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms