Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1O96005 MIR3180-4-201ENST00000582223 153 ntBASIC15.77■□□□□ 0.12
CLPTM1O96005 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.77■□□□□ 0.12
CLPTM1O96005 AL136038.4-201ENST00000603606 1261 ntBASIC15.77■□□□□ 0.12
CLPTM1O96005 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.77■□□□□ 0.12
CLPTM1O96005 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.77■□□□□ 0.12
CLPTM1O96005 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CLPTM1O96005 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLPTM1O96005 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLPTM1O96005 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLPTM1O96005 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CLPTM1O96005 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLPTM1O96005 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLPTM1O96005 PPT1-215ENST00000641471 2368 ntBASIC15.77■□□□□ 0.11
CLPTM1O96005 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CLPTM1O96005 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CLPTM1O96005 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLPTM1O96005 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLPTM1O96005 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.77■□□□□ 0.11
CLPTM1O96005 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CLPTM1O96005 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLPTM1O96005 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.77■□□□□ 0.11
CLPTM1O96005 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CLPTM1O96005 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.77■□□□□ 0.11
CLPTM1O96005 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CLPTM1O96005 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.76■□□□□ 0.11
CLPTM1O96005 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 AP005117.1-202ENST00000581724 1908 ntBASIC15.76■□□□□ 0.11
CLPTM1O96005 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.76■□□□□ 0.11
CLPTM1O96005 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.76■□□□□ 0.11
CLPTM1O96005 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.76■□□□□ 0.11
CLPTM1O96005 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.76■□□□□ 0.11
CLPTM1O96005 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.76■□□□□ 0.11
CLPTM1O96005 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
CLPTM1O96005 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CLPTM1O96005 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.76■□□□□ 0.11
CLPTM1O96005 SPDYE13P-201ENST00000445314 798 ntBASIC15.76■□□□□ 0.11
CLPTM1O96005 VENTXP5-201ENST00000523979 775 ntBASIC15.76■□□□□ 0.11
CLPTM1O96005 AP002490.2-201ENST00000524791 560 ntBASIC15.76■□□□□ 0.11
CLPTM1O96005 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.76■□□□□ 0.11
CLPTM1O96005 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.76■□□□□ 0.11
CLPTM1O96005 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
CLPTM1O96005 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CLPTM1O96005 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.76■□□□□ 0.11
CLPTM1O96005 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.76■□□□□ 0.11
CLPTM1O96005 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CLPTM1O96005 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CLPTM1O96005 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CLPTM1O96005 AC026748.1-201ENST00000624349 3251 ntBASIC15.76■□□□□ 0.11
CLPTM1O96005 AC023908.3-201ENST00000564211 3047 ntBASIC15.76■□□□□ 0.11
CLPTM1O96005 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CLPTM1O96005 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CLPTM1O96005 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.75■□□□□ 0.11
CLPTM1O96005 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CLPTM1O96005 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.75■□□□□ 0.11
CLPTM1O96005 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.75■□□□□ 0.11
CLPTM1O96005 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.75■□□□□ 0.11
CLPTM1O96005 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.75■□□□□ 0.11
CLPTM1O96005 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPTM1O96005 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPTM1O96005 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLPTM1O96005 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.75■□□□□ 0.11
CLPTM1O96005 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLPTM1O96005 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPTM1O96005 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
CLPTM1O96005 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLPTM1O96005 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CLPTM1O96005 FAM86EP-206ENST00000510506 987 ntBASIC15.75■□□□□ 0.11
CLPTM1O96005 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.75■□□□□ 0.11
CLPTM1O96005 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.75■□□□□ 0.11
CLPTM1O96005 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.75■□□□□ 0.11
CLPTM1O96005 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.75■□□□□ 0.11
CLPTM1O96005 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.75■□□□□ 0.11
CLPTM1O96005 AL121956.5-201ENST00000625261 221 ntBASIC15.75■□□□□ 0.11
CLPTM1O96005 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPTM1O96005 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CLPTM1O96005 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms