Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.08■□□□□ 0.32
TOP3BO95985 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TOP3BO95985 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TOP3BO95985 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.08■□□□□ 0.32
TOP3BO95985 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.08■□□□□ 0.32
TOP3BO95985 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.08■□□□□ 0.32
TOP3BO95985 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.08■□□□□ 0.32
TOP3BO95985 AL645728.1-201ENST00000366221 2101 ntBASIC17.08■□□□□ 0.32
TOP3BO95985 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.08■□□□□ 0.32
TOP3BO95985 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TOP3BO95985 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TOP3BO95985 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TOP3BO95985 PCDHA1-201ENST00000378133 2726 ntBASIC17.07■□□□□ 0.32
TOP3BO95985 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TOP3BO95985 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TOP3BO95985 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TOP3BO95985 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP3BO95985 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.07■□□□□ 0.32
TOP3BO95985 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.07■□□□□ 0.32
TOP3BO95985 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP3BO95985 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TOP3BO95985 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP3BO95985 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.07■□□□□ 0.32
TOP3BO95985 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.07■□□□□ 0.32
TOP3BO95985 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.07■□□□□ 0.32
TOP3BO95985 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TOP3BO95985 AC109322.1-201ENST00000524499 1264 ntBASIC17.07■□□□□ 0.32
TOP3BO95985 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.07■□□□□ 0.32
TOP3BO95985 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.07■□□□□ 0.32
TOP3BO95985 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TOP3BO95985 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.07■□□□□ 0.32
TOP3BO95985 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.07■□□□□ 0.32
TOP3BO95985 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TOP3BO95985 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.07■□□□□ 0.32
TOP3BO95985 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.07■□□□□ 0.32
TOP3BO95985 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP3BO95985 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP3BO95985 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.07■□□□□ 0.32
TOP3BO95985 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TOP3BO95985 AC006504.4-201ENST00000592118 1568 ntBASIC17.06■□□□□ 0.32
TOP3BO95985 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TOP3BO95985 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TOP3BO95985 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TOP3BO95985 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
TOP3BO95985 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP3BO95985 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TOP3BO95985 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.06■□□□□ 0.32
TOP3BO95985 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TOP3BO95985 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TOP3BO95985 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP3BO95985 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.06■□□□□ 0.32
TOP3BO95985 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TOP3BO95985 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP3BO95985 AL391005.1-201ENST00000623953 2435 ntBASIC17.06■□□□□ 0.32
TOP3BO95985 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TOP3BO95985 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP3BO95985 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP3BO95985 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TOP3BO95985 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
TOP3BO95985 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP3BO95985 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.06■□□□□ 0.32
TOP3BO95985 ELK2BP-201ENST00000415014 1224 ntBASIC17.06■□□□□ 0.32
TOP3BO95985 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TOP3BO95985 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TOP3BO95985 AL390955.2-201ENST00000603032 514 ntBASIC17.06■□□□□ 0.32
TOP3BO95985 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TOP3BO95985 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TOP3BO95985 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.06■□□□□ 0.32
TOP3BO95985 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.06■□□□□ 0.32
TOP3BO95985 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP3BO95985 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.06■□□□□ 0.32
TOP3BO95985 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP3BO95985 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TOP3BO95985 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP3BO95985 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP3BO95985 AC026691.1-201ENST00000602502 2017 ntBASIC17.06■□□□□ 0.32
TOP3BO95985 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.06■□□□□ 0.32
TOP3BO95985 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TOP3BO95985 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TOP3BO95985 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.05■□□□□ 0.32
TOP3BO95985 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.05■□□□□ 0.32
TOP3BO95985 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TOP3BO95985 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TOP3BO95985 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TOP3BO95985 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.05■□□□□ 0.32
TOP3BO95985 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TOP3BO95985 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
TOP3BO95985 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms