Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDNEP1O95476 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDNEP1O95476 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDNEP1O95476 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CTDNEP1O95476 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.18■□□□□ 0.66
CTDNEP1O95476 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
CTDNEP1O95476 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.18■□□□□ 0.66
CTDNEP1O95476 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDNEP1O95476 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDNEP1O95476 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDNEP1O95476 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDNEP1O95476 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.18■□□□□ 0.66
CTDNEP1O95476 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTDNEP1O95476 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.18■□□□□ 0.66
CTDNEP1O95476 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
CTDNEP1O95476 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.18■□□□□ 0.66
CTDNEP1O95476 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDNEP1O95476 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.18■□□□□ 0.66
CTDNEP1O95476 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.18■□□□□ 0.66
CTDNEP1O95476 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.18■□□□□ 0.66
CTDNEP1O95476 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.18■□□□□ 0.66
CTDNEP1O95476 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDNEP1O95476 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTDNEP1O95476 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.18■□□□□ 0.66
CTDNEP1O95476 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDNEP1O95476 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDNEP1O95476 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDNEP1O95476 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDNEP1O95476 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTDNEP1O95476 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CTDNEP1O95476 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CTDNEP1O95476 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.18■□□□□ 0.66
CTDNEP1O95476 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CTDNEP1O95476 AL592424.1-201ENST00000563624 1536 ntBASIC19.18■□□□□ 0.66
CTDNEP1O95476 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.18■□□□□ 0.66
CTDNEP1O95476 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDNEP1O95476 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTDNEP1O95476 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTDNEP1O95476 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTDNEP1O95476 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.18■□□□□ 0.66
CTDNEP1O95476 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CTDNEP1O95476 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CTDNEP1O95476 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.17■□□□□ 0.66
CTDNEP1O95476 AC016027.1-202ENST00000607927 1699 ntBASIC19.17■□□□□ 0.66
CTDNEP1O95476 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDNEP1O95476 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDNEP1O95476 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
CTDNEP1O95476 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTDNEP1O95476 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDNEP1O95476 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDNEP1O95476 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDNEP1O95476 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTDNEP1O95476 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDNEP1O95476 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDNEP1O95476 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDNEP1O95476 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDNEP1O95476 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CTDNEP1O95476 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTDNEP1O95476 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.17■□□□□ 0.66
CTDNEP1O95476 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.17■□□□□ 0.66
CTDNEP1O95476 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.17■□□□□ 0.66
CTDNEP1O95476 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
CTDNEP1O95476 PDPK2P-202ENST00000562415 1191 ntBASIC19.17■□□□□ 0.66
CTDNEP1O95476 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.17■□□□□ 0.66
CTDNEP1O95476 AP002472.1-201ENST00000577490 586 ntBASIC19.17■□□□□ 0.66
CTDNEP1O95476 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.17■□□□□ 0.66
CTDNEP1O95476 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.17■□□□□ 0.66
CTDNEP1O95476 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTDNEP1O95476 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTDNEP1O95476 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.17■□□□□ 0.66
CTDNEP1O95476 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDNEP1O95476 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CTDNEP1O95476 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CTDNEP1O95476 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDNEP1O95476 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTDNEP1O95476 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTDNEP1O95476 AC022188.1-201ENST00000620960 1664 ntBASIC19.17■□□□□ 0.66
CTDNEP1O95476 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.17■□□□□ 0.66
CTDNEP1O95476 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTDNEP1O95476 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTDNEP1O95476 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTDNEP1O95476 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.16■□□□□ 0.66
CTDNEP1O95476 AC008894.3-201ENST00000624324 3103 ntBASIC19.16■□□□□ 0.66
CTDNEP1O95476 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.16■□□□□ 0.66
CTDNEP1O95476 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CTDNEP1O95476 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.16■□□□□ 0.66
CTDNEP1O95476 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CTDNEP1O95476 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTDNEP1O95476 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTDNEP1O95476 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.16■□□□□ 0.66
CTDNEP1O95476 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTDNEP1O95476 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.16■□□□□ 0.66
CTDNEP1O95476 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTDNEP1O95476 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CTDNEP1O95476 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.16■□□□□ 0.66
CTDNEP1O95476 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTDNEP1O95476 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTDNEP1O95476 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTDNEP1O95476 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTDNEP1O95476 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms