Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIX6O95475 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SIX6O95475 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SIX6O95475 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIX6O95475 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SIX6O95475 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.96□□□□□ -0.17
SIX6O95475 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIX6O95475 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIX6O95475 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.96□□□□□ -0.17
SIX6O95475 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIX6O95475 AL355802.2-201ENST00000402069 882 ntBASIC13.96□□□□□ -0.17
SIX6O95475 CCR12P-201ENST00000446203 998 ntBASIC13.96□□□□□ -0.17
SIX6O95475 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.96□□□□□ -0.17
SIX6O95475 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SIX6O95475 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
SIX6O95475 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC13.96□□□□□ -0.17
SIX6O95475 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SIX6O95475 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.96□□□□□ -0.17
SIX6O95475 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.96□□□□□ -0.17
SIX6O95475 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.96□□□□□ -0.17
SIX6O95475 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SIX6O95475 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
SIX6O95475 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.96□□□□□ -0.17
SIX6O95475 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
SIX6O95475 LINC00895-201ENST00000629028 1637 ntBASIC13.96□□□□□ -0.17
SIX6O95475 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SIX6O95475 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SIX6O95475 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SIX6O95475 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SIX6O95475 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SIX6O95475 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.96□□□□□ -0.18
SIX6O95475 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SIX6O95475 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.95□□□□□ -0.18
SIX6O95475 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.95□□□□□ -0.18
SIX6O95475 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SIX6O95475 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SIX6O95475 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SIX6O95475 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.95□□□□□ -0.18
SIX6O95475 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.95□□□□□ -0.18
SIX6O95475 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SIX6O95475 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
SIX6O95475 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.95□□□□□ -0.18
SIX6O95475 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SIX6O95475 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.95□□□□□ -0.18
SIX6O95475 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SIX6O95475 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
SIX6O95475 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.95□□□□□ -0.18
SIX6O95475 AC015656.1-201ENST00000624209 3578 ntBASIC13.95□□□□□ -0.18
SIX6O95475 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.95□□□□□ -0.18
SIX6O95475 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SIX6O95475 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.95□□□□□ -0.18
SIX6O95475 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.95□□□□□ -0.18
SIX6O95475 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
SIX6O95475 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SIX6O95475 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SIX6O95475 GGT3P-204ENST00000453783 1664 ntBASIC13.95□□□□□ -0.18
SIX6O95475 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.94□□□□□ -0.18
SIX6O95475 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.94□□□□□ -0.18
SIX6O95475 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SIX6O95475 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SIX6O95475 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.94□□□□□ -0.18
SIX6O95475 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.94□□□□□ -0.18
SIX6O95475 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.94□□□□□ -0.18
SIX6O95475 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SIX6O95475 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SIX6O95475 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms