Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.39■□□□□ 0.37
BEST1O76090 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BEST1O76090 PCDHA14-201ENST00000506751 2298 ntBASIC17.38■□□□□ 0.37
BEST1O76090 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BEST1O76090 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST1O76090 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST1O76090 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.38■□□□□ 0.37
BEST1O76090 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.38■□□□□ 0.37
BEST1O76090 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST1O76090 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BEST1O76090 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST1O76090 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
BEST1O76090 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.38■□□□□ 0.37
BEST1O76090 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.38■□□□□ 0.37
BEST1O76090 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
BEST1O76090 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.38■□□□□ 0.37
BEST1O76090 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BEST1O76090 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST1O76090 AC020765.3-201ENST00000613051 740 ntBASIC17.38■□□□□ 0.37
BEST1O76090 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.38■□□□□ 0.37
BEST1O76090 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST1O76090 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST1O76090 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST1O76090 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BEST1O76090 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST1O76090 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.38■□□□□ 0.37
BEST1O76090 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST1O76090 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
BEST1O76090 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BEST1O76090 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
BEST1O76090 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
BEST1O76090 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.38■□□□□ 0.37
BEST1O76090 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.38■□□□□ 0.37
BEST1O76090 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.38■□□□□ 0.37
BEST1O76090 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.38■□□□□ 0.37
BEST1O76090 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BEST1O76090 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BEST1O76090 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BEST1O76090 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.37■□□□□ 0.37
BEST1O76090 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
BEST1O76090 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
BEST1O76090 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BEST1O76090 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
BEST1O76090 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
BEST1O76090 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
BEST1O76090 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
BEST1O76090 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BEST1O76090 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BEST1O76090 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BEST1O76090 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.37■□□□□ 0.37
BEST1O76090 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.37■□□□□ 0.37
BEST1O76090 AC093724.1-201ENST00000448659 1027 ntBASIC17.37■□□□□ 0.37
BEST1O76090 AC105233.2-201ENST00000523697 349 ntBASIC17.37■□□□□ 0.37
BEST1O76090 AF228730.5-201ENST00000530288 346 ntBASIC17.37■□□□□ 0.37
BEST1O76090 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.37■□□□□ 0.37
BEST1O76090 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.37■□□□□ 0.37
BEST1O76090 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.37■□□□□ 0.37
BEST1O76090 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.37■□□□□ 0.37
BEST1O76090 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BEST1O76090 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
BEST1O76090 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
BEST1O76090 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.37■□□□□ 0.37
BEST1O76090 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BEST1O76090 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
BEST1O76090 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BEST1O76090 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BEST1O76090 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST1O76090 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST1O76090 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
BEST1O76090 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.36■□□□□ 0.37
BEST1O76090 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST1O76090 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BEST1O76090 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST1O76090 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BEST1O76090 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
BEST1O76090 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.36■□□□□ 0.37
BEST1O76090 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.36■□□□□ 0.37
BEST1O76090 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST1O76090 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.36■□□□□ 0.37
BEST1O76090 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.36■□□□□ 0.37
BEST1O76090 SPDYE14P-201ENST00000442619 822 ntBASIC17.36■□□□□ 0.37
BEST1O76090 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.36■□□□□ 0.37
BEST1O76090 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.36■□□□□ 0.37
BEST1O76090 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.36■□□□□ 0.37
BEST1O76090 AC026150.2-201ENST00000564693 1156 ntBASIC17.36■□□□□ 0.37
BEST1O76090 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.36■□□□□ 0.37
BEST1O76090 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.36■□□□□ 0.37
BEST1O76090 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.36■□□□□ 0.37
BEST1O76090 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
BEST1O76090 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST1O76090 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.36■□□□□ 0.37
BEST1O76090 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST1O76090 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST1O76090 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.36■□□□□ 0.37
BEST1O76090 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.36■□□□□ 0.37
BEST1O76090 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
BEST1O76090 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.36■□□□□ 0.37
BEST1O76090 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BEST1O76090 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST1O76090 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms