Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PEX1O43933 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PEX1O43933 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.29■□□□□ 0.2
PEX1O43933 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PEX1O43933 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PEX1O43933 HLA-A-202ENST00000376806 1854 ntBASIC16.29■□□□□ 0.2
PEX1O43933 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PEX1O43933 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PEX1O43933 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PEX1O43933 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
PEX1O43933 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
PEX1O43933 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PEX1O43933 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.28■□□□□ 0.2
PEX1O43933 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PEX1O43933 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.28■□□□□ 0.2
PEX1O43933 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 RBM17P3-201ENST00000417687 1192 ntBASIC16.28■□□□□ 0.2
PEX1O43933 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PEX1O43933 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
PEX1O43933 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.28■□□□□ 0.2
PEX1O43933 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.28■□□□□ 0.2
PEX1O43933 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PEX1O43933 AL355877.3-201ENST00000622820 899 ntBASIC16.28■□□□□ 0.2
PEX1O43933 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.28■□□□□ 0.2
PEX1O43933 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PEX1O43933 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.28■□□□□ 0.2
PEX1O43933 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.28■□□□□ 0.2
PEX1O43933 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PEX1O43933 LINC02228-204ENST00000642115 2962 ntBASIC16.28■□□□□ 0.2
PEX1O43933 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PEX1O43933 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.28■□□□□ 0.2
PEX1O43933 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.28■□□□□ 0.2
PEX1O43933 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PEX1O43933 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.28■□□□□ 0.2
PEX1O43933 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PEX1O43933 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PEX1O43933 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PEX1O43933 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.27■□□□□ 0.2
PEX1O43933 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.27■□□□□ 0.2
PEX1O43933 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PEX1O43933 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PEX1O43933 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.27■□□□□ 0.2
PEX1O43933 KRT8P47-201ENST00000604727 1398 ntBASIC16.27■□□□□ 0.2
PEX1O43933 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PEX1O43933 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PEX1O43933 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PEX1O43933 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.27■□□□□ 0.2
PEX1O43933 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.27■□□□□ 0.2
PEX1O43933 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PEX1O43933 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.27■□□□□ 0.2
PEX1O43933 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PEX1O43933 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.27■□□□□ 0.2
PEX1O43933 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.27■□□□□ 0.2
PEX1O43933 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.27■□□□□ 0.2
PEX1O43933 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.27■□□□□ 0.2
PEX1O43933 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.27■□□□□ 0.2
PEX1O43933 AF186996.4-201ENST00000467186 377 ntBASIC16.27■□□□□ 0.2
PEX1O43933 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.27■□□□□ 0.2
PEX1O43933 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.27■□□□□ 0.2
PEX1O43933 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.27■□□□□ 0.2
PEX1O43933 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.27■□□□□ 0.2
PEX1O43933 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PEX1O43933 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.27■□□□□ 0.2
PEX1O43933 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.27■□□□□ 0.2
PEX1O43933 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PEX1O43933 AP001269.4-201ENST00000609611 512 ntBASIC16.27■□□□□ 0.2
PEX1O43933 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.27■□□□□ 0.2
PEX1O43933 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.27■□□□□ 0.2
PEX1O43933 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PEX1O43933 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.27■□□□□ 0.2
PEX1O43933 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PEX1O43933 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.27■□□□□ 0.19
PEX1O43933 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PEX1O43933 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PEX1O43933 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.27■□□□□ 0.19
PEX1O43933 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PEX1O43933 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms