Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LDB2O43679 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LDB2O43679 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LDB2O43679 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LDB2O43679 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LDB2O43679 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LDB2O43679 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.6■□□□□ 0.25
LDB2O43679 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LDB2O43679 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.6■□□□□ 0.25
LDB2O43679 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.6■□□□□ 0.25
LDB2O43679 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.6■□□□□ 0.25
LDB2O43679 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LDB2O43679 OR6D1P-203ENST00000641209 4860 ntBASIC16.6■□□□□ 0.25
LDB2O43679 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.6■□□□□ 0.25
LDB2O43679 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LDB2O43679 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
LDB2O43679 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LDB2O43679 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LDB2O43679 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LDB2O43679 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LDB2O43679 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.6■□□□□ 0.25
LDB2O43679 MTHFR-217ENST00000641820 1569 ntBASIC16.6■□□□□ 0.25
LDB2O43679 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.6■□□□□ 0.25
LDB2O43679 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LDB2O43679 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB2O43679 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.59■□□□□ 0.25
LDB2O43679 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB2O43679 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LDB2O43679 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB2O43679 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB2O43679 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB2O43679 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LDB2O43679 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB2O43679 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB2O43679 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.59■□□□□ 0.25
LDB2O43679 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LDB2O43679 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LDB2O43679 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.59■□□□□ 0.25
LDB2O43679 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LDB2O43679 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LDB2O43679 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.59■□□□□ 0.25
LDB2O43679 KRT18P58-201ENST00000527480 1120 ntBASIC16.59■□□□□ 0.25
LDB2O43679 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.59■□□□□ 0.25
LDB2O43679 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB2O43679 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LDB2O43679 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LDB2O43679 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB2O43679 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB2O43679 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LDB2O43679 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB2O43679 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.59■□□□□ 0.25
LDB2O43679 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LDB2O43679 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LDB2O43679 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LDB2O43679 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB2O43679 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LDB2O43679 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LDB2O43679 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
LDB2O43679 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.59■□□□□ 0.25
LDB2O43679 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.59■□□□□ 0.25
LDB2O43679 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LDB2O43679 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.58■□□□□ 0.25
LDB2O43679 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.58■□□□□ 0.25
LDB2O43679 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
LDB2O43679 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.58■□□□□ 0.25
LDB2O43679 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.58■□□□□ 0.25
LDB2O43679 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LDB2O43679 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LDB2O43679 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
LDB2O43679 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LDB2O43679 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LDB2O43679 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LDB2O43679 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.58■□□□□ 0.24
LDB2O43679 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LDB2O43679 AC074386.1-202ENST00000463561 864 ntBASIC16.58■□□□□ 0.24
LDB2O43679 POU5F1P6-201ENST00000466990 990 ntBASIC16.58■□□□□ 0.24
LDB2O43679 POLD2P1-201ENST00000511220 997 ntBASIC16.58■□□□□ 0.24
LDB2O43679 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.58■□□□□ 0.24
LDB2O43679 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.58■□□□□ 0.24
LDB2O43679 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LDB2O43679 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LDB2O43679 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.58■□□□□ 0.24
LDB2O43679 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LDB2O43679 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.58■□□□□ 0.24
LDB2O43679 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.58■□□□□ 0.24
LDB2O43679 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
LDB2O43679 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LDB2O43679 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
LDB2O43679 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LDB2O43679 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LDB2O43679 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LDB2O43679 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LDB2O43679 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LDB2O43679 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LDB2O43679 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LDB2O43679 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LDB2O43679 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LDB2O43679 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.57■□□□□ 0.24
LDB2O43679 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LDB2O43679 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms