Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.78■□□□□ 0.76
FOXN1O15353 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN1O15353 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
FOXN1O15353 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
FOXN1O15353 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
FOXN1O15353 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.78■□□□□ 0.76
FOXN1O15353 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN1O15353 CHCHD2P3-201ENST00000603038 451 ntBASIC19.78■□□□□ 0.76
FOXN1O15353 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN1O15353 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN1O15353 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN1O15353 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN1O15353 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
FOXN1O15353 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
FOXN1O15353 HTR7P1-202ENST00000624664 4411 ntBASIC19.78■□□□□ 0.76
FOXN1O15353 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN1O15353 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
FOXN1O15353 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.78■□□□□ 0.76
FOXN1O15353 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
FOXN1O15353 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.78■□□□□ 0.76
FOXN1O15353 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN1O15353 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN1O15353 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.77■□□□□ 0.76
FOXN1O15353 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
FOXN1O15353 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.77■□□□□ 0.76
FOXN1O15353 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
FOXN1O15353 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC19.77■□□□□ 0.76
FOXN1O15353 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN1O15353 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN1O15353 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN1O15353 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
FOXN1O15353 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.77■□□□□ 0.76
FOXN1O15353 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN1O15353 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.77■□□□□ 0.76
FOXN1O15353 RNA5SP423-201ENST00000517127 109 ntBASIC19.77■□□□□ 0.76
FOXN1O15353 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN1O15353 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC19.77■□□□□ 0.76
FOXN1O15353 AP000842.3-202ENST00000569238 1080 ntBASIC19.77■□□□□ 0.76
FOXN1O15353 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC19.77■□□□□ 0.76
FOXN1O15353 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC19.77■□□□□ 0.76
FOXN1O15353 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN1O15353 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN1O15353 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.77■□□□□ 0.76
FOXN1O15353 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19.77■□□□□ 0.76
FOXN1O15353 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN1O15353 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN1O15353 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN1O15353 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN1O15353 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
FOXN1O15353 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN1O15353 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN1O15353 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
FOXN1O15353 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
FOXN1O15353 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.77■□□□□ 0.75
FOXN1O15353 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
FOXN1O15353 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN1O15353 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN1O15353 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.76■□□□□ 0.75
FOXN1O15353 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
FOXN1O15353 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
FOXN1O15353 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN1O15353 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN1O15353 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
FOXN1O15353 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN1O15353 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN1O15353 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN1O15353 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.76■□□□□ 0.75
FOXN1O15353 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN1O15353 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
FOXN1O15353 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN1O15353 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.76■□□□□ 0.75
FOXN1O15353 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
FOXN1O15353 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN1O15353 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN1O15353 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC19.76■□□□□ 0.75
FOXN1O15353 AC004840.1-201ENST00000636359 365 ntBASIC19.76■□□□□ 0.75
FOXN1O15353 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
FOXN1O15353 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
FOXN1O15353 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN1O15353 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.76■□□□□ 0.75
FOXN1O15353 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN1O15353 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.76■□□□□ 0.75
FOXN1O15353 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN1O15353 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
FOXN1O15353 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN1O15353 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN1O15353 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
FOXN1O15353 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN1O15353 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
FOXN1O15353 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN1O15353 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN1O15353 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN1O15353 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN1O15353 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN1O15353 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN1O15353 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
FOXN1O15353 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.75■□□□□ 0.75
FOXN1O15353 AC009336.1-201ENST00000608941 1553 ntBASIC19.75■□□□□ 0.75
FOXN1O15353 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN1O15353 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms