Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ATP2A1O14983 AC141586.5-201ENST00000624546 2050 ntBASIC18.94■□□□□ 0.62
ATP2A1O14983 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP2A1O14983 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
ATP2A1O14983 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.94■□□□□ 0.62
ATP2A1O14983 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATP2A1O14983 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.94■□□□□ 0.62
ATP2A1O14983 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.94■□□□□ 0.62
ATP2A1O14983 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
ATP2A1O14983 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
ATP2A1O14983 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.94■□□□□ 0.62
ATP2A1O14983 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATP2A1O14983 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.94■□□□□ 0.62
ATP2A1O14983 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.94■□□□□ 0.62
ATP2A1O14983 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.94■□□□□ 0.62
ATP2A1O14983 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATP2A1O14983 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.94■□□□□ 0.62
ATP2A1O14983 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.94■□□□□ 0.62
ATP2A1O14983 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP2A1O14983 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.94■□□□□ 0.62
ATP2A1O14983 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
ATP2A1O14983 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.94■□□□□ 0.62
ATP2A1O14983 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP2A1O14983 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP2A1O14983 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.94■□□□□ 0.62
ATP2A1O14983 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP2A1O14983 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATP2A1O14983 AL512652.2-201ENST00000625156 1716 ntBASIC18.94■□□□□ 0.62
ATP2A1O14983 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ATP2A1O14983 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
ATP2A1O14983 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP2A1O14983 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ATP2A1O14983 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A1O14983 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A1O14983 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A1O14983 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.93■□□□□ 0.62
ATP2A1O14983 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A1O14983 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A1O14983 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A1O14983 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A1O14983 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
ATP2A1O14983 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A1O14983 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A1O14983 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A1O14983 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.93■□□□□ 0.62
ATP2A1O14983 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A1O14983 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.93■□□□□ 0.62
ATP2A1O14983 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.93■□□□□ 0.62
ATP2A1O14983 BANF1P1-201ENST00000553684 263 ntBASIC18.93■□□□□ 0.62
ATP2A1O14983 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.93■□□□□ 0.62
ATP2A1O14983 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.93■□□□□ 0.62
ATP2A1O14983 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.93■□□□□ 0.62
ATP2A1O14983 AC239800.4-201ENST00000603712 296 ntBASIC18.93■□□□□ 0.62
ATP2A1O14983 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A1O14983 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ATP2A1O14983 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A1O14983 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ATP2A1O14983 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
ATP2A1O14983 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A1O14983 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A1O14983 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A1O14983 AC022144.1-201ENST00000602255 1580 ntBASIC18.93■□□□□ 0.62
ATP2A1O14983 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.93■□□□□ 0.62
ATP2A1O14983 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.93■□□□□ 0.62
ATP2A1O14983 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A1O14983 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
ATP2A1O14983 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A1O14983 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A1O14983 AL645728.1-201ENST00000366221 2101 ntBASIC18.92■□□□□ 0.62
ATP2A1O14983 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.92■□□□□ 0.62
ATP2A1O14983 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
ATP2A1O14983 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.92■□□□□ 0.62
ATP2A1O14983 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A1O14983 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A1O14983 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ATP2A1O14983 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A1O14983 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A1O14983 AC009477.1-201ENST00000452936 217 ntBASIC18.92■□□□□ 0.62
ATP2A1O14983 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.92■□□□□ 0.62
ATP2A1O14983 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.92■□□□□ 0.62
ATP2A1O14983 RN7SL828P-201ENST00000607615 303 ntBASIC18.92■□□□□ 0.62
ATP2A1O14983 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A1O14983 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A1O14983 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.92■□□□□ 0.62
ATP2A1O14983 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ATP2A1O14983 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A1O14983 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A1O14983 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A1O14983 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A1O14983 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.92■□□□□ 0.62
ATP2A1O14983 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A1O14983 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A1O14983 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ATP2A1O14983 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A1O14983 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A1O14983 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ATP2A1O14983 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A1O14983 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A1O14983 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ATP2A1O14983 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms