Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD2O14647 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC22.63■■□□□ 1.21
CHD2O14647 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC22.63■■□□□ 1.21
CHD2O14647 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHD2O14647 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC22.63■■□□□ 1.21
CHD2O14647 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD2O14647 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD2O14647 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CHD2O14647 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CHD2O14647 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD2O14647 PKIG-203ENST00000372887 769 ntTSL 3 BASIC22.63■■□□□ 1.21
CHD2O14647 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC22.63■■□□□ 1.21
CHD2O14647 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC22.63■■□□□ 1.21
CHD2O14647 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC22.63■■□□□ 1.21
CHD2O14647 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC22.63■■□□□ 1.21
CHD2O14647 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC22.63■■□□□ 1.21
CHD2O14647 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHD2O14647 AC120045.2-201ENST00000567334 178 ntBASIC22.63■■□□□ 1.21
CHD2O14647 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHD2O14647 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC22.63■■□□□ 1.21
CHD2O14647 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CHD2O14647 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD2O14647 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD2O14647 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CHD2O14647 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.63■■□□□ 1.21
CHD2O14647 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD2O14647 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CHD2O14647 MSTO2P-201ENST00000314835 1709 ntBASIC22.62■■□□□ 1.21
CHD2O14647 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHD2O14647 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD2O14647 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC22.62■■□□□ 1.21
CHD2O14647 ZBTB12BP-201ENST00000314232 1122 ntBASIC22.62■■□□□ 1.21
CHD2O14647 YBX1P6-201ENST00000442962 1002 ntBASIC22.62■■□□□ 1.21
CHD2O14647 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC22.62■■□□□ 1.21
CHD2O14647 PARP8-206ENST00000503665 572 ntTSL 4 BASIC22.62■■□□□ 1.21
CHD2O14647 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC22.62■■□□□ 1.21
CHD2O14647 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC22.62■■□□□ 1.21
CHD2O14647 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHD2O14647 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD2O14647 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHD2O14647 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHD2O14647 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD2O14647 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
CHD2O14647 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD2O14647 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC22.62■■□□□ 1.21
CHD2O14647 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD2O14647 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CHD2O14647 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC22.62■■□□□ 1.21
CHD2O14647 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CHD2O14647 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC22.62■■□□□ 1.21
CHD2O14647 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC22.62■■□□□ 1.21
CHD2O14647 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC22.62■■□□□ 1.21
CHD2O14647 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC22.62■■□□□ 1.21
CHD2O14647 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD2O14647 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CHD2O14647 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD2O14647 AL021578.1-201ENST00000613646 709 ntBASIC22.61■■□□□ 1.21
CHD2O14647 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC22.61■■□□□ 1.21
CHD2O14647 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
CHD2O14647 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CHD2O14647 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC22.61■■□□□ 1.21
CHD2O14647 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD2O14647 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CHD2O14647 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC22.61■■□□□ 1.21
CHD2O14647 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
CHD2O14647 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD2O14647 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD2O14647 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC22.61■■□□□ 1.21
CHD2O14647 TARDBPP1-201ENST00000442013 1203 ntBASIC22.61■■□□□ 1.21
CHD2O14647 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC22.61■■□□□ 1.21
CHD2O14647 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD2O14647 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
CHD2O14647 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
CHD2O14647 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CHD2O14647 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC22.61■■□□□ 1.21
CHD2O14647 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC22.61■■□□□ 1.21
CHD2O14647 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC22.61■■□□□ 1.21
CHD2O14647 AC092068.3-201ENST00000587894 2016 ntBASIC22.61■■□□□ 1.21
CHD2O14647 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CHD2O14647 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD2O14647 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
CHD2O14647 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC22.6■■□□□ 1.21
CHD2O14647 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CHD2O14647 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.6■■□□□ 1.21
CHD2O14647 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC22.6■■□□□ 1.21
CHD2O14647 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC22.6■■□□□ 1.21
CHD2O14647 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC22.6■■□□□ 1.21
CHD2O14647 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC22.6■■□□□ 1.21
CHD2O14647 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC22.6■■□□□ 1.21
CHD2O14647 PAM16-215ENST00000577031 548 ntTSL 4 BASIC22.6■■□□□ 1.21
CHD2O14647 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CHD2O14647 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD2O14647 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC22.6■■□□□ 1.21
CHD2O14647 GNE-204ENST00000539208 2190 ntTSL 2 BASIC22.6■■□□□ 1.21
CHD2O14647 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD2O14647 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CHD2O14647 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CHD2O14647 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
CHD2O14647 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CHD2O14647 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms