Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL21O00585 MIR1909-201ENST00000411312 80 ntBASIC14.54□□□□□ -0.08
CCL21O00585 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL21O00585 AC022494.1-201ENST00000466044 728 ntBASIC14.54□□□□□ -0.08
CCL21O00585 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.54□□□□□ -0.08
CCL21O00585 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.54□□□□□ -0.08
CCL21O00585 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.54□□□□□ -0.08
CCL21O00585 KRT17P8-201ENST00000540749 863 ntBASIC14.54□□□□□ -0.08
CCL21O00585 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.54□□□□□ -0.08
CCL21O00585 WASH4P-201ENST00000564273 1246 ntBASIC14.54□□□□□ -0.08
CCL21O00585 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.54□□□□□ -0.08
CCL21O00585 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.54□□□□□ -0.08
CCL21O00585 AC026979.3-201ENST00000607315 403 ntBASIC14.54□□□□□ -0.08
CCL21O00585 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCL21O00585 KRT8P39-201ENST00000396270 1433 ntBASIC14.54□□□□□ -0.08
CCL21O00585 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.54□□□□□ -0.08
CCL21O00585 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL21O00585 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.54□□□□□ -0.08
CCL21O00585 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CCL21O00585 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL21O00585 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL21O00585 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CCL21O00585 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL21O00585 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCL21O00585 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.54□□□□□ -0.08
CCL21O00585 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCL21O00585 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.54□□□□□ -0.08
CCL21O00585 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCL21O00585 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL21O00585 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
CCL21O00585 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL21O00585 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CCL21O00585 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL21O00585 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CCL21O00585 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.53□□□□□ -0.08
CCL21O00585 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.53□□□□□ -0.08
CCL21O00585 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CCL21O00585 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL21O00585 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CCL21O00585 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL21O00585 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.53□□□□□ -0.08
CCL21O00585 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CCL21O00585 LINC02012-201ENST00000608206 1725 ntBASIC14.53□□□□□ -0.08
CCL21O00585 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL21O00585 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL21O00585 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL21O00585 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL21O00585 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL21O00585 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL21O00585 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL21O00585 SLC7A15P-201ENST00000424028 1363 ntBASIC14.53□□□□□ -0.08
CCL21O00585 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CCL21O00585 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL21O00585 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL21O00585 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL21O00585 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL21O00585 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL21O00585 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL21O00585 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CCL21O00585 AC112492.5-201ENST00000421897 457 ntBASIC14.53□□□□□ -0.08
CCL21O00585 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CCL21O00585 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL21O00585 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL21O00585 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CCL21O00585 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL21O00585 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL21O00585 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL21O00585 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL21O00585 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL21O00585 AC055876.2-201ENST00000531834 546 ntBASIC14.53□□□□□ -0.08
CCL21O00585 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.53□□□□□ -0.08
CCL21O00585 AC124947.2-201ENST00000547118 1133 ntBASIC14.53□□□□□ -0.08
CCL21O00585 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL21O00585 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL21O00585 AC013467.2-201ENST00000605472 835 ntBASIC14.53□□□□□ -0.08
CCL21O00585 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.53□□□□□ -0.08
CCL21O00585 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.53□□□□□ -0.08
CCL21O00585 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.53□□□□□ -0.08
CCL21O00585 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL21O00585 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL21O00585 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.53□□□□□ -0.08
CCL21O00585 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.53□□□□□ -0.08
CCL21O00585 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CCL21O00585 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCL21O00585 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL21O00585 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCL21O00585 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CCL21O00585 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL21O00585 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL21O00585 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL21O00585 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.52□□□□□ -0.08
CCL21O00585 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCL21O00585 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.52□□□□□ -0.08
CCL21O00585 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL21O00585 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCL21O00585 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCL21O00585 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCL21O00585 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.52□□□□□ -0.08
CCL21O00585 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.08
CCL21O00585 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms