Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 C2orf69P4-201ENST00000565394 541 ntBASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 AC100791.3-201ENST00000617619 330 ntBASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 ZNF142-201ENST00000411696 5926 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
CHKB-CPT1BH3BT56 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 GOLGA8CP-201ENST00000446144 5237 ntBASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 GOLGA8F-201ENST00000526619 5237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 MEGF8-203ENST00000378073 11034 ntTSL 5 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 SEMA6D-201ENST00000316364 6099 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 IDS-201ENST00000340855 7619 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 IQGAP3-201ENST00000361170 5988 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 CCBE1-202ENST00000439986 6227 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
CHKB-CPT1BH3BT56 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms