Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 AC023141.13-201ENST00000604991 943 ntBASIC16.91■□□□□ 0.3
CAPN8A6NHC0 AC007064.4-201ENST00000637740 555 ntBASIC16.91■□□□□ 0.3
CAPN8A6NHC0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 LINC00895-201ENST00000629028 1637 ntBASIC16.91■□□□□ 0.3
CAPN8A6NHC0 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 BCAR1-209ENST00000546196 1340 ntBASIC16.91■□□□□ 0.3
CAPN8A6NHC0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 AC068418.2-201ENST00000577309 3703 ntBASIC16.91■□□□□ 0.3
CAPN8A6NHC0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CAPN8A6NHC0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 METTL21AP1-201ENST00000438852 635 ntBASIC16.9■□□□□ 0.3
CAPN8A6NHC0 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 AC013467.2-201ENST00000605472 835 ntBASIC16.9■□□□□ 0.3
CAPN8A6NHC0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 AC004877.2-201ENST00000623941 599 ntBASIC16.9■□□□□ 0.3
CAPN8A6NHC0 AL645728.2-201ENST00000641974 660 ntBASIC16.9■□□□□ 0.3
CAPN8A6NHC0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CAPN8A6NHC0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
CAPN8A6NHC0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.89■□□□□ 0.3
CAPN8A6NHC0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CAPN8A6NHC0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.89■□□□□ 0.3
CAPN8A6NHC0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.89■□□□□ 0.3
CAPN8A6NHC0 AL603756.1-201ENST00000606511 2163 ntBASIC16.89■□□□□ 0.3
CAPN8A6NHC0 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CAPN8A6NHC0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CAPN8A6NHC0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CAPN8A6NHC0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CAPN8A6NHC0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.89■□□□□ 0.29
CAPN8A6NHC0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 COX20P2-201ENST00000452636 358 ntBASIC16.89■□□□□ 0.29
CAPN8A6NHC0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 KRT19P2-202ENST00000557173 1012 ntBASIC16.89■□□□□ 0.29
CAPN8A6NHC0 AC087641.1-201ENST00000557561 1021 ntBASIC16.89■□□□□ 0.29
CAPN8A6NHC0 MIR4492-201ENST00000581627 80 ntBASIC16.89■□□□□ 0.29
CAPN8A6NHC0 MIR4515-201ENST00000584082 81 ntBASIC16.89■□□□□ 0.29
CAPN8A6NHC0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.89■□□□□ 0.29
CAPN8A6NHC0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms