Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 TERC-201ENST00000602385 541 ntBASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 AC010331.1-201ENST00000611423 582 ntBASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 AL365203.3-201ENST00000609742 2057 ntBASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GOLGA6L4A6NEF3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GOLGA6L4A6NEF3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
GOLGA6L4A6NEF3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.27■□□□□ 0.67
GOLGA6L4A6NEF3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
GOLGA6L4A6NEF3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GOLGA6L4A6NEF3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GOLGA6L4A6NEF3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
GOLGA6L4A6NEF3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
GOLGA6L4A6NEF3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 AC079776.2-201ENST00000641154 1609 ntBASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 AP002383.4-201ENST00000442518 975 ntBASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 AC116407.4-201ENST00000623319 1061 ntBASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.26■□□□□ 0.67
GOLGA6L4A6NEF3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GOLGA6L4A6NEF3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.25■□□□□ 0.67
GOLGA6L4A6NEF3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GOLGA6L4A6NEF3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GOLGA6L4A6NEF3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.25■□□□□ 0.67
GOLGA6L4A6NEF3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GOLGA6L4A6NEF3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC19.25■□□□□ 0.67
GOLGA6L4A6NEF3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GOLGA6L4A6NEF3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.25■□□□□ 0.67
GOLGA6L4A6NEF3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.25■□□□□ 0.67
GOLGA6L4A6NEF3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GOLGA6L4A6NEF3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GOLGA6L4A6NEF3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.25■□□□□ 0.67
GOLGA6L4A6NEF3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GOLGA6L4A6NEF3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GOLGA6L4A6NEF3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GOLGA6L4A6NEF3 AP000867.3-201ENST00000524675 377 ntBASIC19.25■□□□□ 0.67
GOLGA6L4A6NEF3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GOLGA6L4A6NEF3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GOLGA6L4A6NEF3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms