Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 RNF216P1-203ENST00000404404 2427 ntBASIC18.1■□□□□ 0.49
CCDC66A2RUB6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC66A2RUB6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 AC011467.2-201ENST00000598425 242 ntBASIC18.09■□□□□ 0.49
CCDC66A2RUB6 AL590326.2-201ENST00000625139 305 ntBASIC18.09■□□□□ 0.49
CCDC66A2RUB6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC66A2RUB6 SBF1P1-201ENST00000444527 5631 ntBASIC18.09■□□□□ 0.49
CCDC66A2RUB6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC66A2RUB6 CICP14-201ENST00000629111 2732 ntBASIC18.08■□□□□ 0.49
CCDC66A2RUB6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC66A2RUB6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC66A2RUB6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.08■□□□□ 0.49
CCDC66A2RUB6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC66A2RUB6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC66A2RUB6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.08■□□□□ 0.49
CCDC66A2RUB6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 AD001527.2-201ENST00000622994 785 ntBASIC18.08■□□□□ 0.48
CCDC66A2RUB6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC66A2RUB6 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 AC132938.5-201ENST00000624980 1813 ntBASIC18.07■□□□□ 0.48
CCDC66A2RUB6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC66A2RUB6 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms