Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 COX5BP2-201ENST00000392354 334 ntBASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 AC073621.1-201ENST00000392730 636 ntBASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 AC122714.2-201ENST00000502787 707 ntBASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 AC010327.4-202ENST00000591484 748 ntBASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 AL513477.1-201ENST00000602865 2407 ntBASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX49Q9Y6V7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 LAGE3P1-201ENST00000425356 484 ntBASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 KRT18P27-201ENST00000427733 1299 ntBASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 KRT18P3-201ENST00000451602 1288 ntBASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC20.05■□□□□ 0.8
DDX49Q9Y6V7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 AC023274.1-201ENST00000418278 595 ntBASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
DDX49Q9Y6V7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.03■□□□□ 0.8
DDX49Q9Y6V7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms