Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 RPS2P28-201ENST00000314255 741 ntBASIC18.99■□□□□ 0.63
CLIC4Q9Y696 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 MRPL3P1-201ENST00000400109 1033 ntBASIC18.99■□□□□ 0.63
CLIC4Q9Y696 AL450487.1-201ENST00000426799 995 ntBASIC18.99■□□□□ 0.63
CLIC4Q9Y696 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 FAM185BP-201ENST00000443595 716 ntBASIC18.99■□□□□ 0.63
CLIC4Q9Y696 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 AC024909.3-201ENST00000611513 2257 ntBASIC18.99■□□□□ 0.63
CLIC4Q9Y696 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 AC012569.1-201ENST00000591191 1524 ntBASIC18.99■□□□□ 0.63
CLIC4Q9Y696 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CLIC4Q9Y696 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.98■□□□□ 0.63
CLIC4Q9Y696 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 AC022188.1-201ENST00000620960 1664 ntBASIC18.98■□□□□ 0.63
CLIC4Q9Y696 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 AL031284.1-201ENST00000419297 478 ntBASIC18.98■□□□□ 0.63
CLIC4Q9Y696 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 RNA5SP419-201ENST00000515908 135 ntBASIC18.98■□□□□ 0.63
CLIC4Q9Y696 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 AC010654.1-201ENST00000615722 808 ntBASIC18.98■□□□□ 0.63
CLIC4Q9Y696 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLIC4Q9Y696 AL139384.1-201ENST00000612143 3047 ntBASIC18.98■□□□□ 0.63
CLIC4Q9Y696 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 AC004870.1-201ENST00000315132 882 ntBASIC18.97■□□□□ 0.63
CLIC4Q9Y696 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 AL773604.1-201ENST00000617417 272 ntBASIC18.97■□□□□ 0.63
CLIC4Q9Y696 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 LINC01144-201ENST00000626198 1710 ntBASIC18.97■□□□□ 0.63
CLIC4Q9Y696 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.97■□□□□ 0.63
CLIC4Q9Y696 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 AC010491.1-201ENST00000563101 2797 ntBASIC18.96■□□□□ 0.63
CLIC4Q9Y696 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms