Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 KRT8P10-201ENST00000450021 1447 ntBASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 AC009336.1-201ENST00000608941 1553 ntBASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 AL139011.1-202ENST00000642063 584 ntBASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGB1Q9Y5G3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 AL353593.2-201ENST00000602529 1483 ntBASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 HBZP1-201ENST00000354915 429 ntBASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 AL671277.2-201ENST00000458060 996 ntBASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 AL691432.3-201ENST00000621860 400 ntBASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 PPT1-215ENST00000641471 2368 ntBASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 AC006449.6-201ENST00000612330 2296 ntBASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGB1Q9Y5G3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 Z83836.1-201ENST00000624605 1642 ntBASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PCDHGB1Q9Y5G3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms