Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 MPDU1-223ENST00000582151 728 ntBASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 AL513210.1-201ENST00000629608 234 ntBASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 PCDHB19P-201ENST00000570871 2371 ntBASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHB11Q9Y5F2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 PCDHB17P-201ENST00000539533 2393 ntBASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 SPCS2P1-201ENST00000561636 679 ntBASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 ACTL9-202ENST00000612068 1252 ntBASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 AC105339.1-204ENST00000636249 355 ntBASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHB11Q9Y5F2 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 AC078925.2-201ENST00000624013 1973 ntBASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 RNF216P1-203ENST00000404404 2427 ntBASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 FAM86GP-201ENST00000448322 971 ntBASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 AC093512.1-201ENST00000617969 520 ntBASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PCDHB11Q9Y5F2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms