Protein–RNA interactions for Protein: Q9UQL6

HDAC5, Histone deacetylase 5, humanhuman

Predictions only

Length 1,122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5Q9UQL6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 AL592309.1-201ENST00000443127 649 ntBASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 KRT8P48-201ENST00000515599 1220 ntBASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 AC022145.2-201ENST00000598203 171 ntBASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HDAC5Q9UQL6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 PCGF3-213ENST00000620529 1899 ntBASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 CNN2P11-201ENST00000429351 262 ntBASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 AC105233.2-201ENST00000523697 349 ntBASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 AF228730.5-201ENST00000530288 346 ntBASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 AC073389.1-201ENST00000595595 795 ntBASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
HDAC5Q9UQL6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.7■□□□□ 0.91
HDAC5Q9UQL6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 POU5F1P6-201ENST00000466990 990 ntBASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 AC027307.2-201ENST00000591252 911 ntBASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 AC084121.4-201ENST00000641598 221 ntBASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 AF228730.8-201ENST00000642140 221 ntBASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HDAC5Q9UQL6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms