Protein–RNA interactions for Protein: Q9UPV9

TRAK1, Trafficking kinesin-binding protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1Q9UPV9 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRAK1Q9UPV9 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRAK1Q9UPV9 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRAK1Q9UPV9 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC23.07■■□□□ 1.28
TRAK1Q9UPV9 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC23.07■■□□□ 1.28
TRAK1Q9UPV9 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC23.07■■□□□ 1.28
TRAK1Q9UPV9 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRAK1Q9UPV9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRAK1Q9UPV9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
TRAK1Q9UPV9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC23.07■■□□□ 1.28
TRAK1Q9UPV9 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TRAK1Q9UPV9 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC23.07■■□□□ 1.28
TRAK1Q9UPV9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TRAK1Q9UPV9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC23.07■■□□□ 1.28
TRAK1Q9UPV9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 RN7SL692P-201ENST00000464677 288 ntBASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 AC061975.2-201ENST00000581722 295 ntBASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 AC004790.1-201ENST00000612686 536 ntBASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
TRAK1Q9UPV9 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 GNAQP1-201ENST00000444815 1067 ntBASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 AP002490.2-201ENST00000524791 560 ntBASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 CDK4-206ENST00000549606 558 ntTSL 2 BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 AL512361.1-201ENST00000554200 418 ntBASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 SSH2-210ENST00000582084 560 ntTSL 3 BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 RNA5-8SN1-201ENST00000610460 153 ntBASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 RNA5-8SN5-202ENST00000612463 153 ntBASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 RNA5-8SN4-201ENST00000613359 153 ntBASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 RNA5-8SN5-201ENST00000619471 153 ntBASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
TRAK1Q9UPV9 GCK-202ENST00000345378 2421 ntTSL 2 BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 COX5BP8-201ENST00000416911 349 ntBASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 NME2P1-201ENST00000426182 414 ntBASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 NAA38-207ENST00000576861 556 ntTSL 3 BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 AC027307.3-201ENST00000594262 1100 ntBASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 AC020765.3-201ENST00000613051 740 ntBASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC23.04■■□□□ 1.28
TRAK1Q9UPV9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms