Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
USP25Q9UHP3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.12■□□□□ 0.65
USP25Q9UHP3 AL589182.2-201ENST00000619332 1049 ntBASIC19.12■□□□□ 0.65
USP25Q9UHP3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.12■□□□□ 0.65
USP25Q9UHP3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
USP25Q9UHP3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP25Q9UHP3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP25Q9UHP3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP25Q9UHP3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP25Q9UHP3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.12■□□□□ 0.65
USP25Q9UHP3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP25Q9UHP3 AP002414.2-201ENST00000591780 3365 ntBASIC19.12■□□□□ 0.65
USP25Q9UHP3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP25Q9UHP3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.12■□□□□ 0.65
USP25Q9UHP3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP25Q9UHP3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
USP25Q9UHP3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.11■□□□□ 0.65
USP25Q9UHP3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.11■□□□□ 0.65
USP25Q9UHP3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP25Q9UHP3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP25Q9UHP3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP25Q9UHP3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP25Q9UHP3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.11■□□□□ 0.65
USP25Q9UHP3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.11■□□□□ 0.65
USP25Q9UHP3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
USP25Q9UHP3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.11■□□□□ 0.65
USP25Q9UHP3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
USP25Q9UHP3 BX005266.1-201ENST00000473402 457 ntBASIC19.11■□□□□ 0.65
USP25Q9UHP3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.11■□□□□ 0.65
USP25Q9UHP3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.11■□□□□ 0.65
USP25Q9UHP3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.11■□□□□ 0.65
USP25Q9UHP3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.11■□□□□ 0.65
USP25Q9UHP3 NKAPP1-205ENST00000585790 367 ntBASIC19.11■□□□□ 0.65
USP25Q9UHP3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.11■□□□□ 0.65
USP25Q9UHP3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.11■□□□□ 0.65
USP25Q9UHP3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP25Q9UHP3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP25Q9UHP3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.11■□□□□ 0.65
USP25Q9UHP3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP25Q9UHP3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP25Q9UHP3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP25Q9UHP3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP25Q9UHP3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP25Q9UHP3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP25Q9UHP3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.11■□□□□ 0.65
USP25Q9UHP3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.11■□□□□ 0.65
USP25Q9UHP3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP25Q9UHP3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
USP25Q9UHP3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.1■□□□□ 0.65
USP25Q9UHP3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP25Q9UHP3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP25Q9UHP3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP25Q9UHP3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
USP25Q9UHP3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP25Q9UHP3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.1■□□□□ 0.65
USP25Q9UHP3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.1■□□□□ 0.65
USP25Q9UHP3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.1■□□□□ 0.65
USP25Q9UHP3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.1■□□□□ 0.65
USP25Q9UHP3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP25Q9UHP3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
USP25Q9UHP3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
USP25Q9UHP3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.1■□□□□ 0.65
USP25Q9UHP3 MIR3652-201ENST00000579335 131 ntBASIC19.1■□□□□ 0.65
USP25Q9UHP3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.1■□□□□ 0.65
USP25Q9UHP3 AL139424.1-201ENST00000607572 797 ntBASIC19.1■□□□□ 0.65
USP25Q9UHP3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP25Q9UHP3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.1■□□□□ 0.65
USP25Q9UHP3 AL139011.1-202ENST00000642063 584 ntBASIC19.1■□□□□ 0.65
USP25Q9UHP3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP25Q9UHP3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
USP25Q9UHP3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.1■□□□□ 0.65
USP25Q9UHP3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.1■□□□□ 0.65
USP25Q9UHP3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP25Q9UHP3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP25Q9UHP3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
USP25Q9UHP3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP25Q9UHP3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP25Q9UHP3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP25Q9UHP3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP25Q9UHP3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
USP25Q9UHP3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
USP25Q9UHP3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.09■□□□□ 0.65
USP25Q9UHP3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.09■□□□□ 0.65
USP25Q9UHP3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
USP25Q9UHP3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP25Q9UHP3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP25Q9UHP3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
USP25Q9UHP3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP25Q9UHP3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP25Q9UHP3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP25Q9UHP3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP25Q9UHP3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USP25Q9UHP3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.09■□□□□ 0.65
USP25Q9UHP3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.09■□□□□ 0.65
USP25Q9UHP3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USP25Q9UHP3 AC064862.7-201ENST00000604520 867 ntBASIC19.09■□□□□ 0.65
USP25Q9UHP3 AC013467.2-201ENST00000605472 835 ntBASIC19.09■□□□□ 0.65
USP25Q9UHP3 AL121772.3-201ENST00000610840 674 ntBASIC19.09■□□□□ 0.65
USP25Q9UHP3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.09■□□□□ 0.65
USP25Q9UHP3 AL355877.3-201ENST00000622820 899 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms