Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL20A1Q9P218 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL20A1Q9P218 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
COL20A1Q9P218 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL20A1Q9P218 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL20A1Q9P218 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.68■□□□□ 0.58
COL20A1Q9P218 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
COL20A1Q9P218 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
COL20A1Q9P218 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL20A1Q9P218 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL20A1Q9P218 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.67■□□□□ 0.58
COL20A1Q9P218 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.67■□□□□ 0.58
COL20A1Q9P218 AC106886.4-201ENST00000623557 2502 ntBASIC18.67■□□□□ 0.58
COL20A1Q9P218 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL20A1Q9P218 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL20A1Q9P218 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL20A1Q9P218 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL20A1Q9P218 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COL20A1Q9P218 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL20A1Q9P218 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL20A1Q9P218 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
COL20A1Q9P218 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL20A1Q9P218 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL20A1Q9P218 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.67■□□□□ 0.58
COL20A1Q9P218 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.67■□□□□ 0.58
COL20A1Q9P218 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL20A1Q9P218 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.67■□□□□ 0.58
COL20A1Q9P218 AC002472.2-201ENST00000442739 958 ntBASIC18.67■□□□□ 0.58
COL20A1Q9P218 TSPY16P-201ENST00000449843 468 ntBASIC18.67■□□□□ 0.58
COL20A1Q9P218 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.67■□□□□ 0.58
COL20A1Q9P218 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.67■□□□□ 0.58
COL20A1Q9P218 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL20A1Q9P218 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.67■□□□□ 0.58
COL20A1Q9P218 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.67■□□□□ 0.58
COL20A1Q9P218 AC105021.1-202ENST00000570572 669 ntBASIC18.67■□□□□ 0.58
COL20A1Q9P218 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.67■□□□□ 0.58
COL20A1Q9P218 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL20A1Q9P218 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.67■□□□□ 0.58
COL20A1Q9P218 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COL20A1Q9P218 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL20A1Q9P218 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.67■□□□□ 0.58
COL20A1Q9P218 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL20A1Q9P218 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL20A1Q9P218 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL20A1Q9P218 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL20A1Q9P218 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL20A1Q9P218 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.66■□□□□ 0.58
COL20A1Q9P218 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
COL20A1Q9P218 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.66■□□□□ 0.58
COL20A1Q9P218 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL20A1Q9P218 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL20A1Q9P218 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.66■□□□□ 0.58
COL20A1Q9P218 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL20A1Q9P218 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL20A1Q9P218 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.66■□□□□ 0.58
COL20A1Q9P218 AC092171.3-201ENST00000610122 2651 ntBASIC18.66■□□□□ 0.58
COL20A1Q9P218 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL20A1Q9P218 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL20A1Q9P218 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL20A1Q9P218 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.66■□□□□ 0.58
COL20A1Q9P218 AL353705.2-201ENST00000428243 662 ntBASIC18.66■□□□□ 0.58
COL20A1Q9P218 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.66■□□□□ 0.58
COL20A1Q9P218 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.66■□□□□ 0.58
COL20A1Q9P218 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL20A1Q9P218 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.66■□□□□ 0.58
COL20A1Q9P218 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.66■□□□□ 0.58
COL20A1Q9P218 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.66■□□□□ 0.58
COL20A1Q9P218 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.66■□□□□ 0.58
COL20A1Q9P218 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.66■□□□□ 0.58
COL20A1Q9P218 AC061975.2-201ENST00000581722 295 ntBASIC18.66■□□□□ 0.58
COL20A1Q9P218 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.66■□□□□ 0.58
COL20A1Q9P218 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.66■□□□□ 0.58
COL20A1Q9P218 RN7SL828P-201ENST00000607615 303 ntBASIC18.66■□□□□ 0.58
COL20A1Q9P218 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
COL20A1Q9P218 PCGF3-213ENST00000620529 1899 ntBASIC18.66■□□□□ 0.58
COL20A1Q9P218 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL20A1Q9P218 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
COL20A1Q9P218 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
COL20A1Q9P218 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL20A1Q9P218 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL20A1Q9P218 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL20A1Q9P218 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL20A1Q9P218 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
COL20A1Q9P218 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL20A1Q9P218 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL20A1Q9P218 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL20A1Q9P218 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.66■□□□□ 0.58
COL20A1Q9P218 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
COL20A1Q9P218 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.65■□□□□ 0.58
COL20A1Q9P218 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
COL20A1Q9P218 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL20A1Q9P218 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL20A1Q9P218 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
COL20A1Q9P218 RPL37AP1-201ENST00000412502 279 ntBASIC18.65■□□□□ 0.58
COL20A1Q9P218 MTND6P24-201ENST00000440466 518 ntBASIC18.65■□□□□ 0.58
COL20A1Q9P218 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.65■□□□□ 0.58
COL20A1Q9P218 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.65■□□□□ 0.58
COL20A1Q9P218 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.65■□□□□ 0.58
COL20A1Q9P218 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL20A1Q9P218 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms