Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 AC112482.1-201ENST00000492080 688 ntBASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 AC005829.1-201ENST00000570002 483 ntBASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 AC010327.4-202ENST00000591484 748 ntBASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.2■□□□□ 0.82
ECHDC1Q9NTX5 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 AC124067.4-201ENST00000519691 2379 ntBASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 RPSAP43-201ENST00000402237 625 ntBASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 AKAP8P1-201ENST00000434743 1349 ntBASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 PCDHB19P-201ENST00000570871 2371 ntBASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ECHDC1Q9NTX5 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 AL662844.4-201ENST00000606367 2838 ntBASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 ELL2P1-201ENST00000413990 1906 ntBASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 UPF3AP3-201ENST00000420996 769 ntBASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 POU5F1P6-201ENST00000466990 990 ntBASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 YBX1P5-201ENST00000509441 847 ntBASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 AC092865.5-201ENST00000545435 363 ntBASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 AL135744.1-201ENST00000565098 629 ntBASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ECHDC1Q9NTX5 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ECHDC1Q9NTX5 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms