Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 PGAM5P1-201ENST00000518923 814 ntBASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 AC112191.1-201ENST00000523689 701 ntBASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 AC022211.2-201ENST00000585075 2527 ntBASIC15.3■□□□□ 0.04
SDHAF3Q9NRP4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 AC002056.1-201ENST00000395613 760 ntBASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 MCCD1P2-201ENST00000423228 335 ntBASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 AC140658.5-201ENST00000438532 169 ntBASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 AL671883.3-201ENST00000603274 991 ntBASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 AL031055.1-201ENST00000606362 631 ntBASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 AL513190.1-201ENST00000621254 727 ntBASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SDHAF3Q9NRP4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 AC006538.1-201ENST00000567905 1585 ntBASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 RNU1-129P-201ENST00000384064 167 ntBASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 MIR3687-2-201ENST00000577708 61 ntBASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 U1.21-201ENST00000580816 167 ntBASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 MIR3687-1-201ENST00000614492 61 ntBASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 AL161645.1-201ENST00000622716 1255 ntBASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 AC092865.6-201ENST00000642101 219 ntBASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SDHAF3Q9NRP4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms