Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 TEX28P1-201ENST00000613479 1221 ntBASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 AL162274.1-201ENST00000617191 1098 ntBASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 TEX28P2-201ENST00000617764 1221 ntBASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 AC087499.5-201ENST00000452760 1342 ntBASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDLIM7Q9NR12 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
PDLIM7Q9NR12 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.46■□□□□ 0.54
PDLIM7Q9NR12 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 AC245100.3-201ENST00000441281 285 ntBASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 AC004840.1-201ENST00000636359 365 ntBASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM7Q9NR12 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 AL512384.1-201ENST00000406683 331 ntBASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 AC073389.1-201ENST00000595595 795 ntBASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PDLIM7Q9NR12 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PDLIM7Q9NR12 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms