Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 FITM1-202ENST00000559294 800 ntBASIC19.76■□□□□ 0.75
RTN4Q9NQC3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 CYP39A1-205ENST00000619708 2269 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC19.76■□□□□ 0.75
RTN4Q9NQC3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
RTN4Q9NQC3 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 OR2I1P-210ENST00000642037 4691 ntBASIC19.74■□□□□ 0.75
RTN4Q9NQC3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 RTN1-203ENST00000395090 1609 ntTSL 2 BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 AL390955.1-201ENST00000428694 934 ntBASIC19.74■□□□□ 0.75
RTN4Q9NQC3 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.74■□□□□ 0.75
RTN4Q9NQC3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 SEC1P-202ENST00000473944 940 ntBASIC19.74■□□□□ 0.75
RTN4Q9NQC3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 AP000525.1-201ENST00000608286 694 ntBASIC19.74■□□□□ 0.75
RTN4Q9NQC3 AC116562.4-202ENST00000641738 218 ntBASIC19.74■□□□□ 0.75
RTN4Q9NQC3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RTN4Q9NQC3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 LINC00304-203ENST00000565008 1864 ntBASIC19.73■□□□□ 0.75
RTN4Q9NQC3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RTN4Q9NQC3 AC007326.2-201ENST00000624224 7579 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms