Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
MRM3Q9HC36 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.64■□□□□ 0.25
MRM3Q9HC36 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRM3Q9HC36 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MRM3Q9HC36 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRM3Q9HC36 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MRM3Q9HC36 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.64■□□□□ 0.25
MRM3Q9HC36 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.64■□□□□ 0.25
MRM3Q9HC36 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRM3Q9HC36 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRM3Q9HC36 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRM3Q9HC36 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MRM3Q9HC36 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MRM3Q9HC36 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRM3Q9HC36 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRM3Q9HC36 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.63■□□□□ 0.25
MRM3Q9HC36 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
MRM3Q9HC36 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRM3Q9HC36 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRM3Q9HC36 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRM3Q9HC36 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRM3Q9HC36 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.63■□□□□ 0.25
MRM3Q9HC36 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MRM3Q9HC36 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
MRM3Q9HC36 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.63■□□□□ 0.25
MRM3Q9HC36 AL590627.1-203ENST00000421194 1026 ntBASIC16.63■□□□□ 0.25
MRM3Q9HC36 RHOQP3-201ENST00000437982 621 ntBASIC16.63■□□□□ 0.25
MRM3Q9HC36 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.63■□□□□ 0.25
MRM3Q9HC36 AL513480.1-201ENST00000451731 511 ntBASIC16.63■□□□□ 0.25
MRM3Q9HC36 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
MRM3Q9HC36 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.63■□□□□ 0.25
MRM3Q9HC36 AC096734.2-201ENST00000562054 433 ntBASIC16.63■□□□□ 0.25
MRM3Q9HC36 AC120114.3-201ENST00000611923 658 ntBASIC16.63■□□□□ 0.25
MRM3Q9HC36 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
MRM3Q9HC36 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRM3Q9HC36 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MRM3Q9HC36 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRM3Q9HC36 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRM3Q9HC36 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
MRM3Q9HC36 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.63■□□□□ 0.25
MRM3Q9HC36 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.63■□□□□ 0.25
MRM3Q9HC36 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MRM3Q9HC36 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.63■□□□□ 0.25
MRM3Q9HC36 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
MRM3Q9HC36 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRM3Q9HC36 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
MRM3Q9HC36 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.63■□□□□ 0.25
MRM3Q9HC36 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.63■□□□□ 0.25
MRM3Q9HC36 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.62■□□□□ 0.25
MRM3Q9HC36 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
MRM3Q9HC36 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MRM3Q9HC36 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MRM3Q9HC36 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.62■□□□□ 0.25
MRM3Q9HC36 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRM3Q9HC36 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRM3Q9HC36 PCDH8P1-201ENST00000428983 2773 ntBASIC16.62■□□□□ 0.25
MRM3Q9HC36 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRM3Q9HC36 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
MRM3Q9HC36 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.62■□□□□ 0.25
MRM3Q9HC36 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.62■□□□□ 0.25
MRM3Q9HC36 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRM3Q9HC36 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.62■□□□□ 0.25
MRM3Q9HC36 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRM3Q9HC36 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.62■□□□□ 0.25
MRM3Q9HC36 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.62■□□□□ 0.25
MRM3Q9HC36 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRM3Q9HC36 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
MRM3Q9HC36 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MRM3Q9HC36 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.62■□□□□ 0.25
MRM3Q9HC36 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.62■□□□□ 0.25
MRM3Q9HC36 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.62■□□□□ 0.25
MRM3Q9HC36 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
MRM3Q9HC36 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRM3Q9HC36 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRM3Q9HC36 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MRM3Q9HC36 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.62■□□□□ 0.25
MRM3Q9HC36 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MRM3Q9HC36 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MRM3Q9HC36 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.62■□□□□ 0.25
MRM3Q9HC36 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRM3Q9HC36 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MRM3Q9HC36 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MRM3Q9HC36 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRM3Q9HC36 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRM3Q9HC36 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRM3Q9HC36 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRM3Q9HC36 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MRM3Q9HC36 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MRM3Q9HC36 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRM3Q9HC36 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRM3Q9HC36 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
MRM3Q9HC36 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.61■□□□□ 0.25
MRM3Q9HC36 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MRM3Q9HC36 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MRM3Q9HC36 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.61■□□□□ 0.25
MRM3Q9HC36 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MRM3Q9HC36 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.61■□□□□ 0.25
MRM3Q9HC36 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.61■□□□□ 0.25
MRM3Q9HC36 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.61■□□□□ 0.25
MRM3Q9HC36 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms