Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 AC003101.2-201ENST00000612557 442 ntBASIC17.88■□□□□ 0.45
NXF3Q9H4D5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NXF3Q9H4D5 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 AC092580.3-201ENST00000430932 139 ntBASIC17.87■□□□□ 0.45
NXF3Q9H4D5 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 AL158211.3-201ENST00000607385 239 ntBASIC17.87■□□□□ 0.45
NXF3Q9H4D5 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NXF3Q9H4D5 UBALD1-205ENST00000590891 2641 ntBASIC17.86■□□□□ 0.45
NXF3Q9H4D5 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 FAM220BP-201ENST00000377689 816 ntBASIC17.86■□□□□ 0.45
NXF3Q9H4D5 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 BASP1P1-201ENST00000430708 665 ntBASIC17.86■□□□□ 0.45
NXF3Q9H4D5 AC093724.1-201ENST00000448659 1027 ntBASIC17.86■□□□□ 0.45
NXF3Q9H4D5 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 AC097493.3-201ENST00000509725 367 ntBASIC17.86■□□□□ 0.45
NXF3Q9H4D5 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 AC007967.4-201ENST00000614700 386 ntBASIC17.86■□□□□ 0.45
NXF3Q9H4D5 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NXF3Q9H4D5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NXF3Q9H4D5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 879.8 ms