Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS11Q9H270 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS11Q9H270 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS11Q9H270 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.8■□□□□ 0.28
VPS11Q9H270 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS11Q9H270 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.8■□□□□ 0.28
VPS11Q9H270 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS11Q9H270 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.8■□□□□ 0.28
VPS11Q9H270 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS11Q9H270 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.8■□□□□ 0.28
VPS11Q9H270 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.8■□□□□ 0.28
VPS11Q9H270 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS11Q9H270 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VPS11Q9H270 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VPS11Q9H270 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS11Q9H270 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS11Q9H270 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS11Q9H270 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
VPS11Q9H270 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS11Q9H270 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VPS11Q9H270 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VPS11Q9H270 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VPS11Q9H270 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.8■□□□□ 0.28
VPS11Q9H270 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
VPS11Q9H270 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.8■□□□□ 0.28
VPS11Q9H270 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS11Q9H270 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS11Q9H270 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS11Q9H270 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
VPS11Q9H270 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS11Q9H270 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS11Q9H270 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS11Q9H270 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS11Q9H270 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS11Q9H270 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS11Q9H270 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS11Q9H270 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS11Q9H270 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS11Q9H270 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.79■□□□□ 0.28
VPS11Q9H270 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.79■□□□□ 0.28
VPS11Q9H270 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS11Q9H270 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS11Q9H270 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.79■□□□□ 0.28
VPS11Q9H270 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS11Q9H270 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS11Q9H270 AC012615.1-201ENST00000565797 1299 ntBASIC16.79■□□□□ 0.28
VPS11Q9H270 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.79■□□□□ 0.28
VPS11Q9H270 AC010331.1-201ENST00000611423 582 ntBASIC16.79■□□□□ 0.28
VPS11Q9H270 AC073592.4-201ENST00000623827 446 ntBASIC16.79■□□□□ 0.28
VPS11Q9H270 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.79■□□□□ 0.28
VPS11Q9H270 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS11Q9H270 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS11Q9H270 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS11Q9H270 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS11Q9H270 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS11Q9H270 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS11Q9H270 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.78■□□□□ 0.28
VPS11Q9H270 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS11Q9H270 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VPS11Q9H270 AL590787.1-201ENST00000568856 1315 ntBASIC16.78■□□□□ 0.28
VPS11Q9H270 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.78■□□□□ 0.28
VPS11Q9H270 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS11Q9H270 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS11Q9H270 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS11Q9H270 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.78■□□□□ 0.28
VPS11Q9H270 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS11Q9H270 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS11Q9H270 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS11Q9H270 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS11Q9H270 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS11Q9H270 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS11Q9H270 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.78■□□□□ 0.28
VPS11Q9H270 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS11Q9H270 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
VPS11Q9H270 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS11Q9H270 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS11Q9H270 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS11Q9H270 BX005266.1-201ENST00000473402 457 ntBASIC16.78■□□□□ 0.28
VPS11Q9H270 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS11Q9H270 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS11Q9H270 TERC-201ENST00000602385 541 ntBASIC16.78■□□□□ 0.28
VPS11Q9H270 AL591684.3-201ENST00000605187 298 ntBASIC16.78■□□□□ 0.28
VPS11Q9H270 AL353135.1-201ENST00000606729 504 ntBASIC16.78■□□□□ 0.28
VPS11Q9H270 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
VPS11Q9H270 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.78■□□□□ 0.28
VPS11Q9H270 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS11Q9H270 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.78■□□□□ 0.28
VPS11Q9H270 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS11Q9H270 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS11Q9H270 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS11Q9H270 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS11Q9H270 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS11Q9H270 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.78■□□□□ 0.28
VPS11Q9H270 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS11Q9H270 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS11Q9H270 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS11Q9H270 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VPS11Q9H270 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS11Q9H270 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VPS11Q9H270 AC006277.1-201ENST00000624348 1610 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms