Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 TIMM17BP1-201ENST00000545713 516 ntBASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 BTNL10-201ENST00000595971 695 ntBASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.64■□□□□ 0.89
CNTNAP4Q9C0A0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 Z97205.2-201ENST00000564697 1639 ntBASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 AL136982.4-201ENST00000437689 1740 ntBASIC20.63■□□□□ 0.89
CNTNAP4Q9C0A0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 AC104596.2-201ENST00000512793 793 ntBASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
CNTNAP4Q9C0A0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 KRT43P-201ENST00000434019 910 ntBASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNTNAP4Q9C0A0 PAM16-215ENST00000577031 548 ntTSL 4 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms