Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 AC073592.4-201ENST00000623827 446 ntBASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
FOXP3Q9BZS1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 AC004817.3-201ENST00000602957 2129 ntBASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 AL596087.1-201ENST00000400979 1969 ntBASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 AL356309.3-201ENST00000624132 1934 ntBASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.21■□□□□ 0.35
FOXP3Q9BZS1 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
FOXP3Q9BZS1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
FOXP3Q9BZS1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 AC079328.2-201ENST00000561241 3354 ntBASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 MIR1233-2-201ENST00000408138 82 ntBASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 MIR1233-1-201ENST00000408722 82 ntBASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 AC092910.1-201ENST00000482027 1129 ntBASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 AC104109.2-201ENST00000602919 1418 ntBASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.2■□□□□ 0.34
FOXP3Q9BZS1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms