Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 AL603832.2-201ENST00000566195 2125 ntBASIC13.01□□□□□ -0.33
TRGV9Q99603 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
TRGV9Q99603 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV9Q99603 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13□□□□□ -0.33
TRGV9Q99603 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13□□□□□ -0.33
TRGV9Q99603 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13□□□□□ -0.33
TRGV9Q99603 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13□□□□□ -0.33
TRGV9Q99603 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13□□□□□ -0.33
TRGV9Q99603 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13□□□□□ -0.33
TRGV9Q99603 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13□□□□□ -0.33
TRGV9Q99603 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
TRGV9Q99603 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
TRGV9Q99603 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRGV9Q99603 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13□□□□□ -0.33
TRGV9Q99603 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
TRGV9Q99603 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13□□□□□ -0.33
TRGV9Q99603 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13□□□□□ -0.33
TRGV9Q99603 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13□□□□□ -0.33
TRGV9Q99603 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
TRGV9Q99603 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13□□□□□ -0.33
TRGV9Q99603 MTDHP3-201ENST00000594186 672 ntBASIC13□□□□□ -0.33
TRGV9Q99603 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13□□□□□ -0.33
TRGV9Q99603 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13□□□□□ -0.33
TRGV9Q99603 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13□□□□□ -0.33
TRGV9Q99603 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13□□□□□ -0.33
TRGV9Q99603 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13□□□□□ -0.33
TRGV9Q99603 AC004706.3-202ENST00000621574 984 ntBASIC13□□□□□ -0.33
TRGV9Q99603 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13□□□□□ -0.33
TRGV9Q99603 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
TRGV9Q99603 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13□□□□□ -0.33
TRGV9Q99603 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 AC024909.3-201ENST00000611513 2257 ntBASIC13□□□□□ -0.33
TRGV9Q99603 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TRGV9Q99603 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13□□□□□ -0.33
TRGV9Q99603 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13□□□□□ -0.33
TRGV9Q99603 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV9Q99603 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV9Q99603 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.99□□□□□ -0.33
TRGV9Q99603 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.99□□□□□ -0.33
TRGV9Q99603 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC12.99□□□□□ -0.33
TRGV9Q99603 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TRGV9Q99603 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.99□□□□□ -0.33
TRGV9Q99603 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV9Q99603 PI4KAP1-204ENST00000612579 1703 ntBASIC12.99□□□□□ -0.33
TRGV9Q99603 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV9Q99603 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV9Q99603 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
TRGV9Q99603 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV9Q99603 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV9Q99603 AL353732.1-201ENST00000569618 1459 ntBASIC12.99□□□□□ -0.33
TRGV9Q99603 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV9Q99603 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.99□□□□□ -0.33
TRGV9Q99603 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.99□□□□□ -0.33
TRGV9Q99603 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC12.99□□□□□ -0.33
TRGV9Q99603 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV9Q99603 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.99□□□□□ -0.33
TRGV9Q99603 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TRGV9Q99603 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC12.99□□□□□ -0.33
TRGV9Q99603 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV9Q99603 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.99□□□□□ -0.33
TRGV9Q99603 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.99□□□□□ -0.33
TRGV9Q99603 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.99□□□□□ -0.33
TRGV9Q99603 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC12.99□□□□□ -0.33
TRGV9Q99603 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.99□□□□□ -0.33
TRGV9Q99603 CYP2A7P1-201ENST00000595391 815 ntBASIC12.99□□□□□ -0.33
TRGV9Q99603 AL358472.4-201ENST00000633140 710 ntBASIC12.99□□□□□ -0.33
TRGV9Q99603 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.99□□□□□ -0.33
TRGV9Q99603 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV9Q99603 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV9Q99603 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.99□□□□□ -0.33
TRGV9Q99603 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV9Q99603 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.99□□□□□ -0.33
TRGV9Q99603 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms