Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 AC005052.1-201ENST00000625181 2492 ntBASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 PCGF3-213ENST00000620529 1899 ntBASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 RNU1-129P-201ENST00000384064 167 ntBASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 HCG4B-203ENST00000450128 991 ntBASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 AL031432.2-201ENST00000566714 459 ntBASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 AL928711.1-201ENST00000570165 459 ntBASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 U1.21-201ENST00000580816 167 ntBASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 AC010507.1-201ENST00000633895 436 ntBASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 DOC2GP-204ENST00000639052 2548 ntBASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MS4A4EQ96PG1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 MIR3909-201ENST00000579518 119 ntBASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 AL031055.1-201ENST00000606362 631 ntBASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 AC020765.3-201ENST00000613051 740 ntBASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MS4A4EQ96PG1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.52■□□□□ 0.07
MS4A4EQ96PG1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
MS4A4EQ96PG1 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.52■□□□□ 0.07
MS4A4EQ96PG1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MS4A4EQ96PG1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MS4A4EQ96PG1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MS4A4EQ96PG1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.52■□□□□ 0.07
MS4A4EQ96PG1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MS4A4EQ96PG1 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.52■□□□□ 0.07
MS4A4EQ96PG1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.52■□□□□ 0.07
MS4A4EQ96PG1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
MS4A4EQ96PG1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.52■□□□□ 0.07
MS4A4EQ96PG1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MS4A4EQ96PG1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MS4A4EQ96PG1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms