Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 PCDHA12-202ENST00000613593 2588 ntBASIC17.14■□□□□ 0.33
RPRD1AQ96P16 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.14■□□□□ 0.33
RPRD1AQ96P16 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 AC254562.1-201ENST00000417586 456 ntBASIC17.13■□□□□ 0.33
RPRD1AQ96P16 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 KRT8P48-201ENST00000515599 1220 ntBASIC17.13■□□□□ 0.33
RPRD1AQ96P16 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 AC105339.1-204ENST00000636249 355 ntBASIC17.13■□□□□ 0.33
RPRD1AQ96P16 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RPRD1AQ96P16 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 HLA-A-202ENST00000376806 1854 ntBASIC17.12■□□□□ 0.33
RPRD1AQ96P16 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 CNN2P11-201ENST00000429351 262 ntBASIC17.12■□□□□ 0.33
RPRD1AQ96P16 KRT18P34-201ENST00000488218 1270 ntBASIC17.12■□□□□ 0.33
RPRD1AQ96P16 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RPRD1AQ96P16 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 AL031731.1-201ENST00000642131 2094 ntBASIC17.11■□□□□ 0.33
RPRD1AQ96P16 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 AC079140.1-201ENST00000508039 487 ntBASIC17.11■□□□□ 0.33
RPRD1AQ96P16 AP000344.2-201ENST00000512987 629 ntBASIC17.11■□□□□ 0.33
RPRD1AQ96P16 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 AP001160.2-201ENST00000596071 487 ntBASIC17.11■□□□□ 0.33
RPRD1AQ96P16 AC022145.2-201ENST00000598203 171 ntBASIC17.11■□□□□ 0.33
RPRD1AQ96P16 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 AL513210.1-201ENST00000629608 234 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms