Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 FOSL1P1-201ENST00000511041 816 ntBASIC12.51□□□□□ -0.41
LINC00477Q96M19 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00477Q96M19 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LINC00477Q96M19 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00477Q96M19 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00477Q96M19 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00477Q96M19 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00477Q96M19 AL121772.3-201ENST00000610840 674 ntBASIC12.51□□□□□ -0.41
LINC00477Q96M19 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.51□□□□□ -0.41
LINC00477Q96M19 AP001350.2-201ENST00000625104 1094 ntBASIC12.51□□□□□ -0.41
LINC00477Q96M19 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00477Q96M19 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00477Q96M19 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LINC00477Q96M19 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00477Q96M19 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00477Q96M19 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00477Q96M19 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00477Q96M19 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00477Q96M19 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
LINC00477Q96M19 PCDHA1-201ENST00000378133 2726 ntBASIC12.51□□□□□ -0.41
LINC00477Q96M19 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00477Q96M19 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC00477Q96M19 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00477Q96M19 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00477Q96M19 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00477Q96M19 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00477Q96M19 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00477Q96M19 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00477Q96M19 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00477Q96M19 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00477Q96M19 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LINC00477Q96M19 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00477Q96M19 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00477Q96M19 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 MIR4492-201ENST00000581627 80 ntBASIC12.5□□□□□ -0.41
LINC00477Q96M19 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.5□□□□□ -0.41
LINC00477Q96M19 AC004706.3-202ENST00000621574 984 ntBASIC12.5□□□□□ -0.41
LINC00477Q96M19 AL355877.3-201ENST00000622820 899 ntBASIC12.5□□□□□ -0.41
LINC00477Q96M19 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.5□□□□□ -0.41
LINC00477Q96M19 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 PI4KAP1-204ENST00000612579 1703 ntBASIC12.5□□□□□ -0.41
LINC00477Q96M19 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.5□□□□□ -0.41
LINC00477Q96M19 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00477Q96M19 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00477Q96M19 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00477Q96M19 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00477Q96M19 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00477Q96M19 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00477Q96M19 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00477Q96M19 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms