Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC17Q96LX7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 AC100757.3-201ENST00000622361 1406 ntBASIC19.27■□□□□ 0.68
CCDC17Q96LX7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 PCGF3-213ENST00000620529 1899 ntBASIC19.27■□□□□ 0.68
CCDC17Q96LX7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 AC004890.2-204ENST00000481968 304 ntBASIC19.27■□□□□ 0.68
CCDC17Q96LX7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 AC105021.1-202ENST00000570572 669 ntBASIC19.27■□□□□ 0.68
CCDC17Q96LX7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 AL138828.2-201ENST00000615812 383 ntBASIC19.27■□□□□ 0.68
CCDC17Q96LX7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 LINC01144-201ENST00000626198 1710 ntBASIC19.27■□□□□ 0.68
CCDC17Q96LX7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC17Q96LX7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC17Q96LX7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.27■□□□□ 0.67
CCDC17Q96LX7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC17Q96LX7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CCDC17Q96LX7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC17Q96LX7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC17Q96LX7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC17Q96LX7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC17Q96LX7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC17Q96LX7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 FZD10-202ENST00000539839 3282 ntBASIC19.26■□□□□ 0.67
CCDC17Q96LX7 AC005332.8-201ENST00000622750 2735 ntBASIC19.26■□□□□ 0.67
CCDC17Q96LX7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 TSPY16P-201ENST00000449843 468 ntBASIC19.26■□□□□ 0.67
CCDC17Q96LX7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC17Q96LX7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 GGT3P-204ENST00000453783 1664 ntBASIC19.25■□□□□ 0.67
CCDC17Q96LX7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC17Q96LX7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms