Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 AF228730.6-201ENST00000641497 218 ntBASIC16.64■□□□□ 0.25
SIPA1Q96FS4 AC084121.3-201ENST00000641716 218 ntBASIC16.64■□□□□ 0.25
SIPA1Q96FS4 AC105233.6-201ENST00000642093 218 ntBASIC16.64■□□□□ 0.25
SIPA1Q96FS4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIPA1Q96FS4 AC092068.3-201ENST00000587894 2016 ntBASIC16.63■□□□□ 0.25
SIPA1Q96FS4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 AC068880.1-201ENST00000507289 2297 ntBASIC16.63■□□□□ 0.25
SIPA1Q96FS4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 AC100757.3-201ENST00000622361 1406 ntBASIC16.63■□□□□ 0.25
SIPA1Q96FS4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 AC004890.2-204ENST00000481968 304 ntBASIC16.63■□□□□ 0.25
SIPA1Q96FS4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 SPTSSB-204ENST00000617024 1292 ntBASIC16.63■□□□□ 0.25
SIPA1Q96FS4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 AC073439.1-201ENST00000624121 1774 ntBASIC16.63■□□□□ 0.25
SIPA1Q96FS4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SIPA1Q96FS4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 FOXO1B-201ENST00000504678 1527 ntBASIC16.62■□□□□ 0.25
SIPA1Q96FS4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 AL353705.2-201ENST00000428243 662 ntBASIC16.62■□□□□ 0.25
SIPA1Q96FS4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 AL590560.3-201ENST00000623350 461 ntBASIC16.62■□□□□ 0.25
SIPA1Q96FS4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 KRT8P39-201ENST00000396270 1433 ntBASIC16.62■□□□□ 0.25
SIPA1Q96FS4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SIPA1Q96FS4 AL139384.1-201ENST00000612143 3047 ntBASIC16.62■□□□□ 0.25
SIPA1Q96FS4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SIPA1Q96FS4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms