Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
PGBD4Q96DM1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.98■□□□□ 0.47
PGBD4Q96DM1 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 MIR4453-201ENST00000584019 89 ntBASIC17.98■□□□□ 0.47
PGBD4Q96DM1 AC018529.1-201ENST00000613063 361 ntBASIC17.98■□□□□ 0.47
PGBD4Q96DM1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 AP3S2-216ENST00000617003 1561 ntBASIC17.98■□□□□ 0.47
PGBD4Q96DM1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 AC092068.3-201ENST00000587894 2016 ntBASIC17.98■□□□□ 0.47
PGBD4Q96DM1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PGBD4Q96DM1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 AC099398.1-201ENST00000567919 2776 ntBASIC17.97■□□□□ 0.47
PGBD4Q96DM1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 AC080080.1-201ENST00000625121 2420 ntBASIC17.97■□□□□ 0.47
PGBD4Q96DM1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.97■□□□□ 0.47
PGBD4Q96DM1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PGBD4Q96DM1 OR6D1P-203ENST00000641209 4860 ntBASIC17.97■□□□□ 0.47
PGBD4Q96DM1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 AL512638.1-201ENST00000457493 794 ntBASIC17.96■□□□□ 0.47
PGBD4Q96DM1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 AL139011.1-202ENST00000642063 584 ntBASIC17.96■□□□□ 0.47
PGBD4Q96DM1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.96■□□□□ 0.47
PGBD4Q96DM1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms