Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A3Q93084 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.54■□□□□ 0.4
ATP2A3Q93084 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.54■□□□□ 0.4
ATP2A3Q93084 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ATP2A3Q93084 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ATP2A3Q93084 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A3Q93084 AC106886.4-201ENST00000623557 2502 ntBASIC17.54■□□□□ 0.4
ATP2A3Q93084 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A3Q93084 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A3Q93084 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A3Q93084 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A3Q93084 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
ATP2A3Q93084 ADH5P3-201ENST00000433842 1137 ntBASIC17.54■□□□□ 0.4
ATP2A3Q93084 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A3Q93084 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.54■□□□□ 0.4
ATP2A3Q93084 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.54■□□□□ 0.4
ATP2A3Q93084 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.54■□□□□ 0.4
ATP2A3Q93084 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ATP2A3Q93084 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.54■□□□□ 0.4
ATP2A3Q93084 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
ATP2A3Q93084 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.54■□□□□ 0.4
ATP2A3Q93084 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A3Q93084 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A3Q93084 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A3Q93084 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.54■□□□□ 0.4
ATP2A3Q93084 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A3Q93084 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
ATP2A3Q93084 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.54■□□□□ 0.4
ATP2A3Q93084 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.54■□□□□ 0.4
ATP2A3Q93084 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATP2A3Q93084 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A3Q93084 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A3Q93084 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A3Q93084 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A3Q93084 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A3Q93084 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A3Q93084 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A3Q93084 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A3Q93084 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A3Q93084 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A3Q93084 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A3Q93084 AL139400.1-201ENST00000366220 510 ntBASIC17.53■□□□□ 0.4
ATP2A3Q93084 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A3Q93084 AL355306.1-201ENST00000415580 579 ntBASIC17.53■□□□□ 0.4
ATP2A3Q93084 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 AC023141.5-201ENST00000458585 616 ntBASIC17.53■□□□□ 0.4
ATP2A3Q93084 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A3Q93084 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A3Q93084 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A3Q93084 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A3Q93084 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A3Q93084 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP2A3Q93084 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
ATP2A3Q93084 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
ATP2A3Q93084 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.52■□□□□ 0.4
ATP2A3Q93084 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP2A3Q93084 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP2A3Q93084 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP2A3Q93084 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP2A3Q93084 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP2A3Q93084 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.52■□□□□ 0.4
ATP2A3Q93084 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP2A3Q93084 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
ATP2A3Q93084 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
ATP2A3Q93084 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP2A3Q93084 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.52■□□□□ 0.4
ATP2A3Q93084 TIMM8BP1-201ENST00000452384 211 ntBASIC17.52■□□□□ 0.4
ATP2A3Q93084 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.52■□□□□ 0.4
ATP2A3Q93084 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
ATP2A3Q93084 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.52■□□□□ 0.4
ATP2A3Q93084 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.52■□□□□ 0.4
ATP2A3Q93084 AC025678.2-201ENST00000562061 970 ntBASIC17.52■□□□□ 0.4
ATP2A3Q93084 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP2A3Q93084 AC005412.3-201ENST00000580309 715 ntBASIC17.52■□□□□ 0.4
ATP2A3Q93084 MIR4515-201ENST00000584082 81 ntBASIC17.52■□□□□ 0.4
ATP2A3Q93084 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.52■□□□□ 0.4
ATP2A3Q93084 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP2A3Q93084 AC026120.1-201ENST00000611536 926 ntBASIC17.52■□□□□ 0.4
ATP2A3Q93084 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
ATP2A3Q93084 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.52■□□□□ 0.4
ATP2A3Q93084 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms