Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CT55Q8WUE5 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CT55Q8WUE5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CT55Q8WUE5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CT55Q8WUE5 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CT55Q8WUE5 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CT55Q8WUE5 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.4■□□□□ 0.06
CT55Q8WUE5 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.4■□□□□ 0.06
CT55Q8WUE5 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CT55Q8WUE5 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.4■□□□□ 0.06
CT55Q8WUE5 AL080243.2-201ENST00000418783 582 ntBASIC15.4■□□□□ 0.06
CT55Q8WUE5 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.4■□□□□ 0.06
CT55Q8WUE5 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.4■□□□□ 0.06
CT55Q8WUE5 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.4■□□□□ 0.06
CT55Q8WUE5 AL079307.3-201ENST00000556114 283 ntBASIC15.4■□□□□ 0.06
CT55Q8WUE5 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.4■□□□□ 0.06
CT55Q8WUE5 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.4■□□□□ 0.06
CT55Q8WUE5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CT55Q8WUE5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CT55Q8WUE5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CT55Q8WUE5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CT55Q8WUE5 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CT55Q8WUE5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CT55Q8WUE5 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.4■□□□□ 0.06
CT55Q8WUE5 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CT55Q8WUE5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.4■□□□□ 0.06
CT55Q8WUE5 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CT55Q8WUE5 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CT55Q8WUE5 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.4■□□□□ 0.06
CT55Q8WUE5 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CT55Q8WUE5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CT55Q8WUE5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CT55Q8WUE5 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CT55Q8WUE5 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CT55Q8WUE5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
CT55Q8WUE5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CT55Q8WUE5 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CT55Q8WUE5 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CT55Q8WUE5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CT55Q8WUE5 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CT55Q8WUE5 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 AC093724.1-201ENST00000448659 1027 ntBASIC15.39■□□□□ 0.05
CT55Q8WUE5 RN7SL692P-201ENST00000464677 288 ntBASIC15.39■□□□□ 0.05
CT55Q8WUE5 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 AC020765.3-201ENST00000613051 740 ntBASIC15.39■□□□□ 0.05
CT55Q8WUE5 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CT55Q8WUE5 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CT55Q8WUE5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CT55Q8WUE5 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CT55Q8WUE5 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CT55Q8WUE5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.39■□□□□ 0.05
CT55Q8WUE5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CT55Q8WUE5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CT55Q8WUE5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CT55Q8WUE5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CT55Q8WUE5 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CT55Q8WUE5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CT55Q8WUE5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.38■□□□□ 0.05
CT55Q8WUE5 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CT55Q8WUE5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.38■□□□□ 0.05
CT55Q8WUE5 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.38■□□□□ 0.05
CT55Q8WUE5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CT55Q8WUE5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CT55Q8WUE5 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CT55Q8WUE5 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.38■□□□□ 0.05
CT55Q8WUE5 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CT55Q8WUE5 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.38■□□□□ 0.05
CT55Q8WUE5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CT55Q8WUE5 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.38■□□□□ 0.05
CT55Q8WUE5 AL596325.1-201ENST00000563991 1082 ntBASIC15.38■□□□□ 0.05
CT55Q8WUE5 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CT55Q8WUE5 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.38■□□□□ 0.05
CT55Q8WUE5 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.38■□□□□ 0.05
CT55Q8WUE5 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
CT55Q8WUE5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CT55Q8WUE5 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CT55Q8WUE5 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
CT55Q8WUE5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CT55Q8WUE5 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CT55Q8WUE5 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CT55Q8WUE5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms